Parasphaerochaeta coccoides: Spico_1201
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Entry
Spico_1201 CDS
T01469
Name
(GenBank) extracellular solute-binding protein family 5
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc01501
beta-Lactam resistance
scc02010
ABC transporters
scc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_1201
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spico_1201
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spico_1201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_1201
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Spico_1201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
New_glue
Motif
Other DBs
NCBI-ProteinID:
AEC02414
UniProt:
F4GLM0
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All DBs
Position
1393703..1395385
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AA seq
560 aa
AA seq
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MKRIMTVLIGVLLVGALFVSCGGGSQAPATTTTTPAATTTPAATTPAPATTTPAPAAPAA
TATGEVVFRFNNVAEPESLDPHQIQGVPEHRLYMAIFEGLVVPDPVTAESIPGLAESWDI
SEDGKQYTFHLRKANWSDGVPITAHDFVWSWLRMLDPNTASPYAWFPAMFVKGAEEYNSG
AAGADAVSIRALDDYTFQIDLIGPLPYVLGALEHYSFAVVPRHAIEKYGQDWIKPENFVG
NGPYTLSEWIPQQYISVVPNKAYWDKDAVKLDKVIFYSIDDMTTSWNMYLNGEIDWLTNI
PLDQVESAKMRNDYHVSPQISTYYYVFQTQKAPFNNPLVRKAFALSVDRQALVDRVIRQG
QLPAWGIVPEMPGYEGLGEPQYDIALAQDLLAQAGYSNGIGFPKTSILYNTLDSHKAIAE
FLQQEWKNNLGVTLELDNKEWATYLSERNAGNFQIARAGWVGDYQDPNTFLDMFITGAGM
NGGKYSNDIYDLLINEAARMAAGADRFGVLQTAEDILINQDQALMPLYYYVSINMINTSI
WGGWHMNPMDYHPVKDIYKK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatcatgactgttctgatcggcgttttgttggttggtgctcttttcgtctcc
tgcggaggtggtagtcaggctcccgccacaactactaccactcctgcggcaacgacaaca
ccggctgcaacgactccggctccggctaccactacccctgctcccgcagcccctgctgct
acagctacgggtgaggtcgtattccggtttaacaatgtcgcggagccagaatccctcgat
cctcaccagatccagggcgttcccgaacaccgcctctacatggcgatcttcgaaggcttg
gtcgttcctgaccctgtgacagcagaaagcatccccggcctggccgaaagttgggatatc
tccgaagacggcaagcaatacaccttccatctgcgcaaggctaattggagcgatggagtt
cccatcaccgcccatgacttcgtatggtcatggctccgcatgcttgaccccaacacggct
tccccttatgcatggttccccgccatgttcgtcaagggagcagaggagtataactccggt
gctgctggagctgatgctgtcagcatccgtgcgctcgacgattatactttccagattgac
ctgatcggtcccctcccctatgtactgggagcccttgagcactactccttcgcggtcgta
cctcgccacgccattgagaagtacggacaggactggattaagccggaaaacttcgtcgga
aatggtccctacaccctctccgagtggattccccagcagtacatctccgtcgtccccaac
aaggcttactgggacaaggatgccgtcaagctggacaaggtcatcttctactccatcgat
gacatgacgacctcctggaacatgtacctgaacggtgagattgactggttgaccaacatt
cctcttgaccaggtcgagagtgccaagatgcgcaatgactatcatgtctctccgcagatc
tccacctattactatgtcttccagacacagaaggctccgttcaacaatccgttggtcaga
aaggctttcgccctttccgttgaccgccaggctcttgttgaccgtgtaatccgccaggga
cagctccccgcatggggcattgtacctgagatgccgggctatgaaggtctcggtgagcct
cagtatgatatcgctttggcgcaggatcttctggcacaggccggatattcgaacggaatc
ggattccccaagacgtccatcctttacaacactctcgacagccacaaggctatcgctgag
ttcctgcaacaggaatggaagaacaacctgggagtcacgctggagcttgacaacaaggaa
tgggcgacctacttgtccgagagaaatgccggcaacttccagattgctcgtgccggatgg
gtcggtgactaccaggatccgaacaccttccttgacatgttcatcactggcgctggcatg
aacggcggcaagtactccaatgatatctacgacctgctgatcaatgaagcggctcgcatg
gctgccggtgctgatcgttttggtgttctccagactgctgaggacatcctgatcaaccag
gatcaggctctcatgccgttgtactactatgtatccatcaacatgattaatacgagtatc
tggggtggatggcatatgaacccgatggactaccatccggtcaaggacatttacaagaag
tag
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integrated database retrieval system
