Parasphaerochaeta coccoides: Spico_1273
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Entry
Spico_1273 CDS
T01469
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_1273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_1273
Transporters [BR:
scc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spico_1273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
DUF87
AAA_22
AAA_29
nSTAND3
AAA_21
FtsK_SpoIIIE
RsgA_GTPase
AAA_18
nSTAND1
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEC02481
UniProt:
F4GM06
LinkDB
All DBs
Position
complement(1481722..1483533)
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AA seq
603 aa
AA seq
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MRKLLAYIRPYAGKMSVVFIIKFIGTIMDLFLPWILAFIIDSVIPRKDVTLILWYGSAMV
VCSFVAWTCNVIPNRKASWIATRITRSLRHDLFSRVLALSAAQADVYGSPSLISRVSSDT
YNVHEMVAKMQRLGVRAPILLIGGMAITLSLEPVLTLILIALMPLIGIVVYAISRRGIPL
YTVVQKKVDALVRAVRSDITGIRVIKALSKMEYEKERFSVVNKDVTDAERHAAHVMAVTN
PLMNLFLNLGLTLVVLFGAWRVNDGLTEPGRIIAFLSYFTIILTAMLSITRMFVILSKGI
ASARRIEEIMDMEGERKQEKSRTMNTDGGITKGMDDAQMDNGEVYSEKTLVEGSAEKAHV
VFNDVSFFYPRTTAGVRNVSFALKKGQTLGIIGATGSGKSTVVKLLLRLYDVNSGSVRIN
GVDVRDIPDDVLYEQFGVVFQNDFILADTIRENISFGRDLDDQAILCAAEIAQATPIIAG
HPEGLDYRLAIMGANISGGQKQRILIARALAAQPAILVMDDAMSALDYRTDALVRGGIAR
SLAETTTIIVAQRISSIMHADHILVMEDGQVIGSGTHGHLVATCEVYRDISSSQIGGQDE
KRA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaactgcttgcctacatacgtccctacgcggggaaaatgagcgtggtgttcatc
atcaagttcataggaaccatcatggaccttttcctgccatggatacttgcattcatcatt
gattcggtcatccctcggaaggatgtcacgctcatcctgtggtatggctcggcaatggtg
gtctgttcctttgtcgcatggacgtgcaacgtaatccccaaccgcaaggcttcatggatt
gccacccgtatcacccgttcgctccgccacgaccttttctccagggtgctggctctctcg
gctgcccaggcggatgtctacggctccccgtccctcatctcacgcgtcagctccgatacg
tacaatgtccatgagatggtggcaaagatgcaacgtctcggcgtgagggctcccatcctg
ctgataggcggcatggcgatcaccctcagccttgagcctgtactcacgctgatccttatt
gccctgatgcccctcataggcattgtagtgtacgccatttcccgcaggggcatcccgcta
tacacggtggtacagaagaaggttgatgccctcgtccgtgccgtgcgctctgacataacc
ggcatacgcgtcataaaagccttgtcaaagatggagtatgagaaggaacgtttctccgtt
gtgaacaaggatgtcacggacgcggaaagacatgccgcccacgtcatggccgtgaccaat
ccactgatgaaccttttccttaatcttggactgactttggtggtcttgttcggagcatgg
cgggtcaacgatggactgaccgagccgggcagaatcattgcttttctttcttatttcacc
atcatccttaccgccatgctcagcatcacgcgcatgttcgtcatcctgtccaagggcata
gcttccgcccgccgcatagaggaaatcatggacatggaaggcgaacgaaagcaggaaaag
agccggacgatgaatacggacggaggaattacaaaggggatggacgatgcccagatggat
aatggagaggtgtacagtgaaaaaacccttgtcgaggggagcgcggaaaaagcgcatgtc
gtctttaatgatgtgtccttcttctatccccgtacaacggcaggagtacggaatgtctcc
tttgcgctgaagaagggacagacacttggcatcattggagctactggcagcgggaaaagc
accgtggtaaagctccttctccgtctctatgatgtcaattcaggttcggtacgcatcaat
ggtgtggatgtccgtgatattcccgatgatgtcttatatgagcagttcggcgtggttttc
cagaatgatttcatccttgcggatactatcagggagaacatatcctttggccgcgacctt
gatgatcaggcaattctgtgtgctgcggagattgctcaagctacgcccatcatagccgga
catccggaggggttggactacaggcttgcaatcatgggggcgaacatcagcggaggacag
aaacagcggattcttattgcccgcgccctggccgcccaacctgccatcctggtcatggat
gacgcgatgagcgccttggattaccgtactgatgccttggtgaggggaggcattgcccgt
tccctggcggaaaccacgacaatcattgttgcccagaggatcagctcaatcatgcatgcc
gaccatatccttgtgatggaggacggtcaggtgattggcagtggtactcacggacatctg
gtagcaacctgtgaagtctaccgtgatatcagcagctcgcagataggagggcaggatgaa
aagcgcgcctag
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