Parasphaerochaeta coccoides: Spico_1344
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Entry
Spico_1344 CDS
T01469
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03030
DNA replication
scc03410
Base excision repair
scc03420
Nucleotide excision repair
scc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spico_1344
03410 Base excision repair
Spico_1344
03420 Nucleotide excision repair
Spico_1344
03440 Homologous recombination
Spico_1344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scc03032
]
Spico_1344
03400 DNA repair and recombination proteins [BR:
scc03400
]
Spico_1344
Enzymes [BR:
scc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spico_1344
DNA replication proteins [BR:
scc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Spico_1344
DNA repair and recombination proteins [BR:
scc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Spico_1344
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spico_1344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF6384
Motif
Other DBs
NCBI-ProteinID:
AEC02550
UniProt:
F4GHG1
LinkDB
All DBs
Position
complement(1573530..1576370)
Genome browser
AA seq
946 aa
AA seq
DB search
MTENRQQDFLFDDIENDKDIETDGTESNGEDVTKKNLPPVDGHPRKLFIIDGFGIIYRSY
FAFISRPLKDYEGNNVSALFGFISTLLMILREWKPDYLVIAMDEKGPTFRHELYPEYKAT
RDDAPEDLHAQVPRIMEVLDALGVPHIGKVGMEADDIIATLCANATAQGIESVMVTGDKD
LLQLVDDMTKALRPPRKGESSYRLFGVKEVEDEFGIRADQIIDYLAILGDSSDNVPGIKG
LGEKGAIKLLTEYGSFEVLYDHLDEMSPSVRKKLEDGREMGVLSKKLVKLRDDLFTVDSF
DSPRFTVSSVDYEKAIPLLEKARAGSLVTQLRKMAENGDGHSDSPAVPTAGKGGYRAETD
AAGVDALFIQALKEKGQVAFDVETTDIDVMKAVPVGFSLSWKAGEAWYVPLVAGGKTVSN
EKAMKAVVKKHLENPALGVIGQNLKYDYKVMARWGVRIANPVFDTMVAAWLLDSASGIYN
MDKLADKYLGYVTITYDQVVPKGALFSDVPLDKAVQYAAEDADVTWRLYETFAPMLAERK
MTSLMDDLEMPLLRVLADMELEGVRLDVDRLIMFGEEIDGRVEKITREIYELCGHEFNIN
SPKQLQTVLFGERGLPVGRKTASGPSTAVETLEKLVGLDPVPALILDYRGLVKLKNTYID
ALPEQVDVNTGRVHTTFIQTGTATGRLASRNPNLQNIPIRNDDGRRIRSAFVPERGYVFL
SADYAQIELVVLAHVTGDEGLREAFLAGQDVHRHTASLIFNVKPEDVTPDQRRIAKTINF
GVMYGMSTFRLSNELAISHSQAAEFIDSYFKRYHGVKTFVDETRKKAEETGFVSTMFGHE
RHVPEIRSSNRMEKSGAERVVVNTIIQGTAADIMKLAMLRISRSLKDSGINARLLLQVHD
ELIFEVASGQEEKLSVLVKDAMEKAVKLSVPLRSSVETGASWGDMH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaccgacagcaggatttcctgttcgatgatatagaaaatgacaaagatata
gaaaccgatggaacagaaagcaatggagaggatgttacgaaaaaaaatcttcctccggta
gacgggcatcccagaaagctgttcatcattgatggctttggaatcatttaccgttcttat
tttgccttcatatcacgtccgctcaaggattatgaaggcaacaacgtgtcggcgctcttt
ggcttcatctccacgttgctgatgattctccgtgaatggaagcctgactatctggtcata
gccatggacgagaaaggaccgactttccgtcatgagttgtatccggaatataaggcgacc
cgtgacgatgctccggaggatcttcatgcccaggtacctcgcatcatggaagtccttgat
gccctcggcgttcctcatattggaaaggtagggatggaggccgatgatatcatagcaact
ctctgcgccaatgcgacggcacagggcatagaaagcgtcatggtcacaggagacaaggat
ttgctccagttggtagatgatatgacaaaggctctgcgtcctccccgcaaaggagagtca
tcttaccgtcttttcggagtcaaggaagtggaagatgagttcggcatccgcgccgaccag
atcatcgactatctggcaatcctcggcgacagctcggacaatgttcccggcatcaagggg
ctgggagagaagggtgcaatcaagctgttgaccgaatatggctcctttgaggtgttatat
gaccatctggacgagatgagtccctctgtccgcaaaaaactggaagacggacgggagatg
ggcgtgctgagcaaaaaactggtaaaactccgggatgatctttttaccgtcgattccttc
gacagccctcggttcaccgtgtccagcgttgactatgagaaagccatccccttgctggaa
aaagccagggccggaagtcttgtcacgcaactgcgaaagatggcagaaaacggtgatggt
cattcagattcccctgctgttccgactgctggtaaaggggggtatcgggcggaaacagat
gctgctggggtcgatgcgctgttcatccaggctctgaaagaaaaaggacaagtggctttt
gatgtggaaaccactgatatcgatgtgatgaaggctgttcccgttggcttttccctgtca
tggaaggctggggaggcatggtatgtcccgctggtagccggaggaaagacggtatccaat
gagaaggcaatgaaggcagtggtgaagaagcatctggaaaatcccgcccttggtgtcatc
ggacagaatctcaagtacgattacaaagtcatggcacggtggggagtccgcattgccaac
cccgtctttgataccatggtcgccgcctggctccttgacagcgcgtcaggcatctacaac
atggacaagctcgctgacaagtacttgggttatgtcaccatcacatatgaccaagtcgtt
cccaagggcgcgttgttttccgatgttccgcttgataaagctgtgcaatatgccgccgaa
gacgccgatgtgacgtggcggctttacgagacttttgccccgatgctcgctgaacgtaag
atgaccagtctgatggatgacctggaaatgccgttgctgcgtgtccttgcggacatggag
ctggaaggtgtccgtctggatgttgacaggctcatcatgttcggagaggagatagacggg
agggtagagaagatcacccgtgaaatctatgagctgtgcggtcatgaattcaatatcaat
tcaccaaagcagctccagacggtgcttttcggagagagaggtctgccggtcggcaggaag
accgcctccggtccctccacggcggtggagactctggaaaagctggtcgggctggatcct
gttcctgccctgattcttgactatcgcggcttggtgaaactgaagaatacctatattgat
gccctgcctgaacaggttgatgtgaacaccggtcgcgtccatacgactttcattcagaca
ggaaccgctaccggacgcttggccagccgcaatcctaacctacagaacatacccatccgc
aatgatgacggacggcgtatccgttccgctttcgtgccggaacgggggtatgtcttcctg
tcggcggactatgcccagattgagttggtcgtccttgcccatgtcactggtgatgaaggt
ttaagggaggcgttcttggctggtcaagacgtacaccgtcatactgcgtcactcatcttc
aacgtgaagccggaagatgtgacgcccgaccaaaggcgcattgccaaaaccattaacttt
ggcgtgatgtatggaatgagtaccttccgtctgtccaatgagctggcaatctcacattcc
caagcggcggagttcattgactcctatttcaagcggtaccacggagtaaagacttttgtg
gatgagacacggaaaaaagccgaggagacagggtttgtcagtacgatgttcggccacgag
cgtcatgtcccggagatcagaagttccaacaggatggagaagtccggggcggagagggtt
gtggtcaatacaatcatccaggggacggcggcggacatcatgaagttggccatgctaagg
attagccgcagtctgaaggattctggcatcaatgcgcgcctgttgctccaggttcatgac
gaactgatcttcgaggttgcttccggacaagaagaaaaactctctgtcttggtcaaggac
gctatggaaaaggcggtgaagttgtctgttcccttgcgttccagcgtcgagacaggggcg
agctggggagacatgcactga
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