Parasphaerochaeta coccoides: Spico_1350
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Entry
Spico_1350 CDS
T01469
Name
(GenBank) (Uracil-5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
scc
Parasphaerochaeta coccoides
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scc03009
]
Spico_1350
Enzymes [BR:
scc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Spico_1350
Ribosome biogenesis [BR:
scc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spico_1350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
Methyltransf_23
FtsJ
Methyltransf_31
Methyltransf_11
DNA_methylase
DUF3375
Abhydrolase_9
Motif
Other DBs
NCBI-ProteinID:
AEC02556
UniProt:
F4GHG7
LinkDB
All DBs
Position
complement(1581244..1582422)
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AA seq
392 aa
AA seq
DB search
MSKNAVSIRSLVQGGAGLGMREDGKLLFVEGALPGETVSYHLAAEKSSWAQAVVDEILEP
SPQRVAPRCPFYDECGGCNLMHLSEDSQAEEKQRLFIDAMERTGGIPRDSLVLEPPASAT
GWEYRSRSAFHVDERLRQAGFLGRRSRSLVPLPSCPVLVSELSEVLAGRDERLWKAARKV
KESLARISVFAGDADISYGKIPVVATVDGIPFHVSAQVFFQSNRLLMPSLIRFVLSHVKG
ERVMDLYAGVGVFSAFLEREGHTVIAVEKEPDCLELARLNAPRTRFHTAATEKWHPSMSE
KVDTVVVDPPRTGLAPSVPALIASWKPERVIYVSCDSVTLARDLRKFLSEGYSPTIAQVF
DLYPQTSHYEAAVVLDRMGELDRMGKSRSSRA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaacgctgtcagcatccgttcccttgtccaaggaggcgcgggactcggcatg
agggaggatgggaaactccttttcgtagaaggcgctttgccgggcgagacggtttcctat
catcttgctgctgagaagtcttcttgggcgcaagcagtggttgacgaaatccttgagccg
tcgccacagcgggtcgcgccacgttgccccttttatgatgagtgtggaggatgcaacttg
atgcatctgtccgaggattcccaggctgaagaaaagcagcggttgttcattgatgccatg
gaacgtaccggaggtattccacgggacagtcttgtccttgaacctcctgcctctgccacg
ggatgggagtatcggagccgttccgctttccatgtagatgagcgactacgccaggcgggt
ttccttggcaggcggagccgttccctggttccgcttccttcctgtccggtgctggtttct
gagctttctgaagtgctggccggacgggacgaacgcttatggaaagccgcaagaaaggta
aaggaatcccttgcgcggataagcgtgtttgccggagacgccgacatttcttatgggaag
ataccggtcgtcgcgacagttgacggtatccctttccatgtgagcgcacaggtattcttt
caatccaatcgcctgctcatgccttctctcataagattcgttctttcccatgtcaaggga
gagagggtgatggatctgtatgcgggcgtcggggttttcagtgcgtttctggaacgtgaa
ggacacacggtcattgcggtggagaaggagccggattgcctggagctggcaaggcttaat
gcgccgcgtacccgctttcataccgccgccacggaaaagtggcatccttccatgagtgag
aaggtcgatacggttgtcgttgacccaccccgtaccggtctggctccttccgtaccggct
ctcattgcatcgtggaaaccagagcgggtcatctatgtgtcatgtgacagcgtgacactg
gcgcgagacttgcggaaattcctctctgaggggtatagtcctaccatagcccaggtcttt
gacctgtatccacagacatcccattatgaggctgcggtggtgctggacaggatgggagag
ctggacaggatgggaaagagcaggagcagcagagcatga
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