Parasphaerochaeta coccoides: Spico_1403
Help
Entry
Spico_1403 CDS
T01469
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
scc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_1403
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spico_1403
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_1403
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spico_1403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NAD_binding_3
DUF5976
Motif
Other DBs
NCBI-ProteinID:
AEC02607
UniProt:
F4GHL8
LinkDB
All DBs
Position
1651510..1652541
Genome browser
AA seq
343 aa
AA seq
DB search
MKRRHLPHFCFTAGITTAGIIACMIFVVSCYRNPANTVTLLSSRPESQEKPIRMAFLTNM
QGGEHWGNMKSGARFARSMHGNMTIEFYAPINEADYHGQTELLQQVVDADFDALVISSSH
ATYAASTIQQALAKGMMVVTVDNDILAADGTSLAKAHVGTDSREVGKKAAMKGMELAPQV
RKALVVASVPESTSMMEKTAAITEIFSESGIEFQVIFCHADATIAYGQVKAALESPVAID
IIIALEEYAAHGVADALAETSAKARPVFIGSGNSRYQLNLLETGRMDALVVENSFTMGYL
AVEAAASLAGGRNVVPVPVEFAIVTPLTMWEEHHQRLLFPLTN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacggcaccttccgcatttctgtttcaccgcaggcatcactaccgcaggcatc
attgcatgcatgatattcgtggtctcctgttaccggaatccggcgaacacagtcaccctg
ctttcttcacgtcctgaatcccaggagaagccgatacgcatggctttcctgaccaacatg
cagggaggagaacactgggggaacatgaaatccggcgcacgtttcgcccgcagcatgcac
gggaacatgaccattgagttctatgctcccatcaacgaggctgactatcacggacagacg
gaacttctccagcaggtagtggacgcggacttcgatgcgctcgtgatttcctccagtcat
gctacatatgccgcatcgacgatacagcaggctctggcaaaaggtatgatggtcgtcacc
gtcgataacgatatccttgccgccgatggcacgtcccttgcaaaggctcatgtcggaacc
gactcacgggaagtggggaagaaagccgccatgaagggcatggagcttgcgccacaggta
cgcaaggcactggttgtcgcctctgtgccggaaagcacttccatgatggaaaagacggct
gcaatcactgaaattttttctgaatccggtatcgaatttcaagtgattttctgccatgcg
gacgcaaccatagcctacgggcaggtcaaggcagcactggaaagtcctgtagccatagac
atcatcatagcactggaggaatacgccgcacacggagtggccgacgcccttgccgagaca
tcagcaaaggcaagaccggttttcatcgggtcgggtaattcccgctatcagttgaacctg
ctggaaacaggaaggatggacgcactggtcgttgagaactcattcacaatgggatatctc
gccgtggaagcggcagcttccctggcaggcggacggaacgtcgtccccgtgccggtggaa
tttgccattgtcaccccgctaacaatgtgggaagaacatcatcagcggcttctttttcct
ctgacgaactga
DBGET
integrated database retrieval system