Parasphaerochaeta coccoides: Spico_1453
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Entry
Spico_1453 CDS
T01469
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
scc
Parasphaerochaeta coccoides
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scc03016
]
Spico_1453
Enzymes [BR:
scc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Spico_1453
Transfer RNA biogenesis [BR:
scc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spico_1453
Prokaryotic type
Spico_1453
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AEC02656
UniProt:
F4GI58
LinkDB
All DBs
Position
complement(1713254..1714153)
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AA seq
299 aa
AA seq
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MARSDWRRPASHPYEEGCVRRVRMTVAYDGTGYSGWQHQRNAPSVQAEIEDALYRLTGHS
VTVVGSGRTDSGVHALGQVCHFDLPDERFPAVVFKRALNAFLPPAIRIMDSEETNDSFHA
RFSAMAREYRYLIKREADMTPFDSGRVWVVKELPSLELLKAHAAEIAGTHDFTTFTAAGD
MCERRHRDIYVSDFSVEKDIHGAEVLVYTICGNAFLYKMVRSIVGTLFFLVLGGVPATET
ARRLAARDRSQAGRTASAHGLYLSRISFDEKEYEWFEHLHPSMEMPSEDREREDSDDEA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcagtgactggagacgtcctgcttcccatccgtatgaagaaggatgcgtcagg
cgagtccgcatgacggtcgcttatgacgggacaggctacagcgggtggcagcaccagcgc
aatgcgccgagtgtccaggcggagatagaagacgcgctctaccggttgaccggacattcc
gtcacagtcgtaggaagcggacgaaccgattccggcgttcacgccttggggcaggtctgc
catttcgacctccctgacgaacgttttccggcggtagtcttcaaacgcgcattgaacgcc
tttctgcctcctgccatacgcatcatggacagtgaggaaaccaacgactctttccatgcg
cggttctccgccatggcacgggaataccgatatctcatcaagagagaagctgacatgact
ccctttgactcaggtcgtgtctgggtagtgaaggaactgccgtccctggaacttctgaaa
gctcatgccgcggaaatagccggaacccatgatttcactacgttcactgccgcgggagat
atgtgcgaacgtcgccatagggacatctatgtatctgatttctccgtagagaaggatatc
cacggagccgaggtgctggtgtatactatctgcggcaacgcattcctctacaagatggtg
cgttccattgtggggacgcttttcttcttggtgttgggaggcgtgcctgccacggagact
gcacggcggcttgccgcgcgggacagaagccaagccgggcggacagcctccgcccatggc
ctgtacctgtcacggatttcctttgacgagaaggaatatgaatggtttgagcatcttcat
ccttccatggagatgccgtcggaagatagggagagggaggatagcgatgatgaagcctga
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