Parasphaerochaeta coccoides: Spico_1535
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Entry
Spico_1535 CDS
T01469
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_1535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_1535
Transporters [BR:
scc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spico_1535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_16
AAA_30
SMC_N
DEAD
AAA
T2SSE
AAA_23
Zeta_toxin
AAA_18
AAA_15
AAA_29
SRP54
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AEC02738
UniProt:
F4GIX0
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Position
complement(1822286..1824076)
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AA seq
596 aa
AA seq
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MARNKYDIDERLDVPFSWKNLSSVMTYIGRVKGRMSVALLLSAVGSVVGLTGPLILQKVM
DEVIPSRNMEALVRMTILFALTIVVNVGFNAIRTIIVTQAGQQIIHDIRQDVFAHLQKLP
FSYYDNRPHGKILVRVISYVNSISDILSNGVLNFIIELINIVFIAIFMFRVSMPLASITV
AGLVFVAAFIFYIKPRQRRAWQRVSDKNSNLNAYVQESIQGSRVTQIFDRQKKNVGILRR
LSRMRRIAWMKAIVVSNSVWVFTESMSQIVFTLVYIAGVYLISPMATFGVLLAMATYANR
FWQPLINLANIYNNFINSVAYLERIFETINEPVLIEDAPHARPLPPVKGKVDFTHVSFSY
DASRPILTDVSFSVSPGESIAVVGPTGAGKTTILSLISRFYNVQEGSICIDGHDLMDVTL
ESLRSQMGIMLQDSFLFSGTIADNIRYGRLDASDAEVERVATMLQADAFIRNLPDGYHTV
VKEGGRGLSQGERQLIAFARTLLADPRILVLDEATSSIDSRTEELLQRGISILLEGRTSF
IVAHRLSTVRSCTRIMYVHGGKILETGSHDELMALRGHYWRLHTVQMKELAAHGKI
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaacaaatatgatatcgacgagaggctcgatgtccctttcagttggaagaat
ctgagcagtgtcatgacgtatatcggtcgtgtaaaaggtcgcatgtccgtggctctgctg
cttagtgctgtcggcagcgtggtggggcttacaggccccctgatactccagaaggtgatg
gatgaggtcattccttcccggaatatggaagccttggtcaggatgaccattctttttgcc
ctcaccatagtggtcaatgtcggcttcaacgcaatccgtactatcattgtgacccaggca
ggacagcaaatcatccacgatatccgccaggatgtctttgcgcatctccagaagcttcct
ttttcttattatgacaacaggccgcacggtaaaatcctggtgcgggtaatcagctatgta
aattccatcagcgatattctctccaacggagtgctgaatttcatcattgagcttatcaat
attgtgttcattgccattttcatgttccgtgtcagcatgcccctggcgtccattacggtc
gcaggtctggtattcgtcgccgccttcatcttctatatcaagccccggcagcggcgggca
tggcagagggtgtccgacaagaattccaatctcaatgcgtatgtgcaggaatccatccaa
ggttcacgggtcactcaaatcttcgaccgtcagaaaaagaacgtggggattctccggcgt
ctttcccgcatgcggcgcattgcgtggatgaaggcgattgtagtctcgaacagcgtatgg
gtattcaccgagtcaatgagccagattgtgtttaccctggtatatattgccggtgtatac
ctgattagccccatggcgaccttcggcgtactccttgccatggctacctacgccaaccgt
ttttggcagcctctgattaaccttgcgaacatctacaataattttatcaactccgtggcc
tatcttgagaggatattcgagacgatcaacgagccggttctgattgaggacgctcctcat
gcccgacctctgccgccggtaaagggcaaggttgatttcacgcatgtttcattttcctat
gatgcctccagacccatcctgaccgatgtttccttctctgtctctccaggggaaagcata
gcggtcgtaggccctacgggagcggggaagacaactatcctcagtcttatcagcaggttc
tacaatgtccaggaggggagcatttgcatagatggtcatgacctgatggatgtcactttg
gagtcactgcgcagccaaatgggaatcatgctccaagatagtttcctgttctccggaaca
atagcggacaacattcgctatggacggcttgatgcttctgacgcggaagttgaaagagtc
gccaccatgttgcaggctgatgcattcatcaggaatcttccggacggataccatactgtg
gtcaaggagggcgggaggggactctcccagggagagcggcagctcattgctttcgcccgc
actttgcttgctgatccccggatactggtacttgatgaggctacgagcagcattgattcc
agaaccgaggagcttcttcagcggggcatatcaattcttcttgaaggcaggacatcattc
attgtcgcgcacaggctttcaacagtccgttcctgtacccgcatcatgtatgtccatgga
gggaaaatcctggaaacgggttcccacgatgagctgatggcactgcgcgggcattactgg
cggctccacacagtccagatgaaggaattggcggctcatgggaaaatttag
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