Parasphaerochaeta coccoides: Spico_1556
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Entry
Spico_1556 CDS
T01469
Name
(GenBank) transcriptional regulator, DeoR family
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
scc
Parasphaerochaeta coccoides
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scc03000
]
Spico_1556
Transcription factors [BR:
scc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Spico_1556
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
AbiEi_4
HTH_PafC
Fe_dep_repress
HTH_5
MarR
Put_DNA-bind_N
HTH_24
TrmB
HTH_IclR
DUF977
TFIIE_alpha
FaeA
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AEC02758
UniProt:
F4GJL1
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All DBs
Position
complement(1850385..1851203)
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AA seq
272 aa
AA seq
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MSKPSKTVQQTPLVPAGRRKVIMGILREKGVVRVTELSEVLGVAEMTIRRDLALLEEQGS
LERTHGGAVTADKKTNEPHYYSMFWEQKMKVHSKEKREIASYATSLIRKADTLFVNSGTT
TMEFLKMLDIDLVKVISNNPLAPIVSLSEKITVISTGGELRRESFSFVGESAIDMVSSVF
ASKAVIGGDGVSVRFGVTSPSQSEAGLTRQMVRNSQGKVILLADSSKIGKVSNFLVAPIE
DIDILVTDSGISESDRAEFEQKGVTVIVVSGG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccttcgaagaccgtgcaacagactcccctcgtacctgccggaagacggaag
gtcatcatggggatattgagggaaaaaggcgtggtgcgcgtcaccgagctgagtgaagtc
cttggcgtggcggaaatgacaatccgtcgggatcttgctctgctggaagaacagggaagt
ctggaaagaacccatggcggcgcggtcacagcggacaagaaaaccaacgagcctcactat
tactccatgttctgggaacagaagatgaaagtccacagcaaggagaagcgtgagattgcc
tcatacgcgacaagcctgatacgcaaggctgatactcttttcgtcaattccggcactacg
acgatggaatttcttaagatgctggacattgatttggtaaaggtcatatcgaacaatcct
cttgcgcccatagtctcactgtccgagaagattaccgtcatctccacaggaggggaactg
cggcgtgaatcgttctcctttgtaggagaaagcgcgattgacatggtaagttcagtcttt
gcgtccaaggctgtcattggcggggacggggtgagcgtccggttcggagtgacgtctccc
agccaatcagaagctggcttgaccagacagatggtcaggaactcccaagggaaagtcatt
cttctcgctgacagcagcaagatagggaaagtgtcgaatttccttgtcgcgcccattgag
gacatagatattcttgtcactgacagtggcatatcagagtccgaccgggcggagtttgag
cagaagggcgtgactgtcattgttgtttctggcggctga
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