Parasphaerochaeta coccoides: Spico_1580
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Entry
Spico_1580 CDS
T01469
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
scc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_1580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spico_1580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_1580
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Spico_1580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AEC02782
UniProt:
F4GJN5
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All DBs
Position
complement(1874863..1876026)
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AA seq
387 aa
AA seq
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MCKGKKFSVVVMLIVLTASVLAFAAGSKEAAASEIVIGSVQDITGPTSSLGKMVDSGARL
AIDEVNAKGGVNGKTIRIITYDTKGDVNEAINAFTRAVTTDKVSALIGPPVANIALALAP
ISERYSVPFLNLAIDPKVQIKADGTPYKNMFGMQPSADQQGSIMAQYAIEKRGFGKFGII
YNESNAYAVSLLAPFVDTVKANGKTVAVTTSYTANDKDFKTLLNNILQAGVDAIYSPGYT
QELILITQQARAMGFKGALIYGLDAGPPFNNLLGESADNIYFINNIDTTEPHLEAITKSV
KATQNIDVTNKFFLGYDIGNILVQALGAVGSDSVAIRDYVENLKGYQGLTGVITMDAKTH
FPLGLEMVMHTYEGTTPVVLERYSASY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaaggaaaaaaattttctgtagttgtcatgcttattgtcctgaccgcgtctgtc
ctggcatttgctgctggcagtaaggaagcagcggcatcggaaatcgtcattggaagcgta
caggacataaccggccctacgtcttcccttggaaaaatggttgattcaggagcccgcctg
gccattgatgaagtgaacgccaagggtggagtgaatggcaagacaatccgtatcatcacc
tacgataccaaaggagatgtcaacgaagctatcaacgcttttacccgtgccgtcacaacg
gacaaagtttcggcgctcatcggacctccggttgcgaacatcgctttggcgctcgctccg
atttccgaacgctattcagttcctttcttgaatcttgccattgatcccaaagtccagatc
aaagctgacggtacaccatacaagaacatgttcggtatgcagcccagcgctgaccaacag
ggttcaatcatggctcagtacgcaattgaaaaacgcggcttcgggaaattcggcatcatt
tacaatgaatccaatgcgtatgcggtctccctgctcgcgccgttcgtggacacagtgaaa
gccaacggcaagacagtagccgttaccacaagttacacggccaatgacaaggacttcaaa
accctgttgaacaacatcctccaggctggcgttgatgcaatctattcccctgggtacacc
caagaattgattctcattacgcagcaggctcgtgccatgggcttcaagggtgctttgatt
tacggtctggatgctggccctccgttcaacaatctgcttggcgaatcagcggacaacatc
tatttcatcaacaacatcgataccactgaaccacaccttgaggcaatcaccaagtctgtc
aaagcaacccagaacattgatgtgaccaacaaattcttccttggttatgacattggcaac
attcttgttcaagctcttggggctgttggcagtgattctgtcgccatccgtgactatgtg
gagaacttgaagggataccagggattgaccggtgtcattaccatggatgcaaagacgcac
ttccctctcggattggaaatggtcatgcacacgtatgaaggtaccactcctgtcgtcctt
gaaagatacagtgcttcatactga
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