Parasphaerochaeta coccoides: Spico_1644
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Entry
Spico_1644 CDS
T01469
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
scc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_1644
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spico_1644
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_1644
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spico_1644
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
ABC_sub_bind
DUF4999
Motif
Other DBs
NCBI-ProteinID:
AEC02842
UniProt:
F4GKF9
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All DBs
Position
complement(1948495..1949589)
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AA seq
364 aa
AA seq
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MKKVLTVLLIFVMAMSLPLFAQGSKDSASKKPYIAVVSKGEQHDFWQQVKKGSAAAATDF
GVDITFEGPPSESDVQRQVEMLNSALAKNPNAIALAALNTGSVLDQLNEAMSKKIPVIGF
DSGVPEAPAGSIWANASTNNYNAAGLGAEKLFEVIKPLIEKATVAAPVRIVVLNQDASGE
SLLSRGRGFRDAMVNLIDGQTSLTKADIAVVGNPAYIATDSPTGGRKVFIEMMVPASAAL
TDAANTAQAALNRIKSDNIVGIFCSNEATVKGLLTATNDGIALANTYKGLVVVGFDAGAA
QKNAVREGYFLGSITQDPYSIGYKAVELAYKAFKGEPVADVDTGAKFYNAANMDNDDIKG
LIYD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtgcttactgtacttttgattttcgtcatggcgatgtcattgccgttgttt
gcccaagggtcaaaggacagcgccagcaagaaaccgtacatcgccgttgtatccaagggc
gaacagcatgatttctggcagcaggtaaagaagggttccgcggctgcggcgactgatttc
ggcgttgacatcacttttgaagggcctccttcggaaagtgacgtacagcgtcaggtcgag
atgctcaacagtgcattggcaaagaatcctaatgctattgcccttgccgcgctgaacact
ggcagtgtccttgaccagctcaatgaagccatgagcaagaagattcctgtgattggtttt
gactcaggcgtgcctgaagctcccgctggttccatctgggcgaatgcctcgacgaacaac
tacaatgccgcaggtctcggcgcggagaagttgtttgaagtcatcaagccactcattgag
aaggctacggtcgccgctcctgtccgtatcgtcgtcctgaaccaggatgcatccggcgaa
tccctgctgagcagaggacgcggcttccgtgatgccatggtcaatctgatcgatgggcag
acttccctcaccaaggctgacatagcggtcgtcggcaaccctgcctacattgctaccgac
agccccacaggtggacgcaaggtcttcattgaaatgatggttcccgcttctgctgccctg
actgacgcggcgaatacggctcaggctgccctgaacaggataaagagcgacaatatcgtc
ggtattttctgctccaacgaagcaacggtgaagggtctgcttaccgccaccaatgacggt
atcgctctcgccaacacctacaagggactggtagtcgtcgggtttgacgctggcgcagcc
cagaagaacgctgtccgtgagggatacttccttggttccatcacgcaggatccgtattcc
attggatacaaggccgtcgagcttgcttacaaggcattcaagggcgagccagtcgctgat
gtggataccggcgccaagttctacaacgccgcgaacatggacaatgatgacatcaagggt
ctgatctacgactga
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integrated database retrieval system
