Parasphaerochaeta coccoides: Spico_1840
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Entry
Spico_1840 CDS
T01469
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03030
DNA replication
scc03430
Mismatch repair
scc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spico_1840
03430 Mismatch repair
Spico_1840
03440 Homologous recombination
Spico_1840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scc03032
]
Spico_1840
03400 DNA repair and recombination proteins [BR:
scc03400
]
Spico_1840
Enzymes [BR:
scc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spico_1840
DNA replication proteins [BR:
scc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spico_1840
DNA repair and recombination proteins [BR:
scc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spico_1840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_5
TIP49
AAA_30
AAA_22
AAA_14
AAA_19
AAA_16
AAA_2
Rad17
nSTAND3
RNA_helicase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AEC03038
UniProt:
F4GLZ7
LinkDB
All DBs
Position
2189726..2191597
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AA seq
623 aa
AA seq
DB search
MAFEVTATRRRPQTFEDMAGQDFFVSTISNAIKQKRIAHAYLFSGPRGVGKTSSARILAK
ALNCEQGPTAHPCGVCSNCKEITAGNSTDVIEIDGASNTSVNDIRAIKDEVMFPPQKCRY
KIYIIDEVHMLSTSAFNALLKTIEEPPEYIIFIFATTETQKVPATIRSRCQQFHFRLFTM
ETIVKLLTEAAAETDVQADHDALLWIARESTGSMRDAYTLFDQIVSFSHGHITLASIQDK
LGVSGVESLNNVVLSIQEGTTARTDDFLSELLSSGVSVEQCVRDFASFFRMILLLRHGVT
SVDALGMRPDAIPKAIVDSYTDEQAEAALEMFLQVYRDIRYSVNPKFELELAVSRLAQLP
YTASSHAVMQSLSAMKRELLGLAGIQPSQEPIAATTGKAGKTSPTDGQERLVIERPWEKK
TQTAPPPRQNQTPPPESSPLEPSPFESSQPVSKTSEKQERQRETMDSDDVTHVTQPLASP
QYSEPLPATEKAKASPSLPRPFTKDDFPALVDAFERAKNPTRLNLTYLTDAYEKNNSLVL
EFATRFSADSISKVIPFLRSAIRSICGYDGPVEIMMRRQEQKEDLPTQIGLDPIDQKIAR
MFNGKTETVHQIELAHGEKDDAQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgaagtaacagcgacacgccgccgtccccagaccttcgaggacatggccgga
caagatttcttcgtctcgacaatcagcaacgccatcaagcagaaacgcatcgcccatgct
tatctgttttccgggcctcgcggcgtcggcaagacatcttccgcccgcatcctggcaaaa
gccctgaactgtgaacagggccccacggctcatccctgcggcgtatgttccaactgcaag
gaaatcaccgctggcaacagcacggatgtcatagaaattgacggtgcaagcaatacatcg
gttaacgacatccgcgccatcaaggacgaggtcatgttccctccccagaaatgccgctat
aaaatttacatcatcgatgaagtccatatgctctccaccagcgccttcaacgccttgctg
aagaccatcgaggagccgcctgaatacatcattttcatattcgctacgaccgagacgcag
aaagtccccgcgacaatccgcagccgttgccagcagttccacttccggctctttaccatg
gaaaccattgtgaagctcctcacggaggcagcagcggaaacagatgtccaggcagaccat
gatgccctgttgtggatagcccgtgagtctaccggctccatgcgtgacgcatacaccctg
ttcgaccagattgtctctttctcacatggacatatcactttggcgagcatccaggacaag
ctcggagtctccggcgtagaaagcctgaacaatgtagtcctctctattcaggaaggcacg
acagcacggacggacgactttctttcggaacttctctcctccggtgtttcagtggaacag
tgcgtcagggacttcgcttcatttttcaggatgatactcctgctcaggcatggtgtcaca
tcggttgatgccttgggaatgagaccagatgccattccgaaggccattgtcgattcctat
accgacgagcaagcggaagccgccctggagatgttccttcaggtgtaccgggacatccgt
tattcagtaaacccgaagttcgagctggagctggcagtcagccgtcttgctcagcttccc
tataccgcatcgtcccacgccgtgatgcagtcattgtctgccatgaagcgggaacttttg
ggtcttgcaggcatacaaccctctcaggaacccattgccgccactacagggaaagctggc
aagacatcacctacggacgggcaggaaaggttggtcattgaaagaccatgggaaaagaaa
acccagacagcacctccgccacgccagaaccagacgcctcccccggaatcaagccctctc
gaacccagcccctttgaatccagtcaacctgtatccaaaacctcggaaaaacaggagcgt
cagcgggaaaccatggattcagatgatgtgactcatgtgacacaaccgttagcttccccc
cagtattccgaaccacttcccgctacggagaaagcaaaagcatctccatcacttccccga
cctttcaccaaggatgacttccctgccttggtggatgcttttgaaagggcaaagaatcct
acccgcctgaacctgacgtatctgaccgacgcatatgagaaaaataatagcttggttctg
gagtttgccacccgtttcagcgcagacagcatcagcaaggtcattcctttcctgcgctcc
gctatccgttccatctgtggatacgatgggcctgtggaaatcatgatgcggaggcaggaa
cagaaagaagacctgccgacacagattggacttgatccgatcgaccagaagattgcgcgc
atgttcaatggaaagacggagaccgtccatcagattgagcttgcgcatggagaaaaggac
gacgcgcaatga
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