Parasphaerochaeta coccoides: Spico_1860
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Entry
Spico_1860 CDS
T01469
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
scc
Parasphaerochaeta coccoides
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scc03400
]
Spico_1860
DNA repair and recombination proteins [BR:
scc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Spico_1860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
ChlI
DUF7125
DnaB_C
RecA_N
AAA_22
AAA_24
AAA_16
AAA
KdpD
NTPase_1
AAA_5
DUF7129
nSTAND3
SLFN-g3_helicase
Rad51
AAA_14
GvpD_P-loop
DAP3
nSTAND_NTPase5
ABC_tran
NPHP3_N
HEM4
MCM
AAA_30
GvpD_bR2
Motif
Other DBs
NCBI-ProteinID:
AEC03058
UniProt:
F4GM82
LinkDB
All DBs
Position
complement(2216848..2218212)
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AA seq
454 aa
AA seq
DB search
MKGKSIRYACTECGHTEAKWLGLCPSCGAWNSFVEEAVVPDTKGSARKLAPTTMKKPLPL
AEIVVTEGFRFDTGMTELDRVLGGGVMRGASVLLGGEPGIGKSTLMLQVLGQCGAAGHKV
LYVSGEESSAQIKLRAQRLDVPLNKVDVYCETRLEELASTILSSSPDVLVIDSVQTLWSS
AIPSAPGTVNQIRACCMELVGLAKQSETAIFLIGHVTKEGQLAGPKVIEHLVDTVLYFEQ
ASSGIRLVRAEKNRFGTVDEIGIFLMGEKGLTAVPDPSGFFLSRRNDGLTPAGIAYTAVV
EGTRTFLVEIQALVVPAKGGFSRIYSDRIDSARVSRVAAVLEKHGGLRIGDHDIYVNVGG
GMKLSEVSIDLPLALSLWSAMISRPLPDKLVSFGELSLAGEVRPVSFPDKRAKAAVDMGF
PRLLVPSSASLDKKAGLCRASSISDALKVCGEIK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggaaatccatacgctacgcatgcacggagtgcggtcatacagaagcaaaatgg
ctgggactctgcccttcatgcggagcgtggaactcttttgtcgaagaagctgttgttcct
gataccaaaggttctgcccgtaaacttgctcctacgaccatgaagaaaccgcttcccctt
gctgaaatcgtcgtcacggaaggctttcgctttgataccggaatgacggagctggacagg
gtactgggcggtggcgtgatgcgtggggcatctgtccttcttggaggagagcccggcata
gggaaatccaccttgatgcttcaagtcctgggacagtgtggcgcggcgggacataaagtt
ctttatgtatcgggggaagaatcctccgcgcagattaagctgagagctcagcggctggat
gtccccctgaataaagttgacgtctattgtgaaacacggctggaagaacttgcttcgacc
attttgtcttcttctccggatgtccttgtcattgattccgtccagactctctggtcttct
gccattccttccgcgcccggcacggtcaatcaaatcagagcgtgctgcatggaattggta
ggactggcaaaacagtcagaaacagcaatcttccttatcggacatgtcaccaaggaaggg
cagcttgccggccccaaggtgatcgagcatcttgttgatactgtgttgtactttgaacag
gcttcttccggtatccggctggttcgggctgaaaagaaccgtttcgggacggtcgatgag
atagggattttcctgatgggagagaaggggctgaccgcggttcctgatccgtccggattt
ttcctttcccgcaggaacgacggactgactcccgcaggcatcgcgtataccgcagtggtc
gaaggaacccggactttcttagtggaaatacaggcattggtcgttccggcaaagggaggc
ttctcccgtatctattcggatcgaattgattccgcccgtgtatcacgagtcgcggctgtg
ttggaaaaacatggtgggttgcgtatcggcgaccacgatatttatgtaaatgtcggggga
gggatgaagttgtccgaggtttcaattgaccttccccttgccctgtctctctggtcggca
atgatatcgcgaccgttgccggataaactggtcagtttcggcgagttgagtctggctggg
gaagtgaggccggtaagttttcctgataaaagagcaaaagcggcagtggacatgggcttt
ccgcgtcttcttgtcccgtcctccgcttccctggataaaaaagcaggtctttgccgcgcc
tcaagtatctcagacgcattaaaagtttgtggagaaataaaataa
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