Gracilinema caldarium: Spica_0055
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Entry
Spica_0055 CDS
T01573
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scd03000
]
Spica_0055
Transcription factors [BR:
scd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Spica_0055
BRITE hierarchy
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GFIT
Motif
Pfam:
Peripla_BP_4
LacI
HTH_31
HTH_3
Xre-like-HTH
HTH_Tnp_ISL3
Sigma70_r4_2
DUF2859
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AEJ18227
UniProt:
F8EY68
LinkDB
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Position
60225..61274
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AA seq
349 aa
AA seq
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MTVKEIAKLAGVSIGTVDRVLHGRGRVSPETKARIEEIIKKSGFTPNPIARGLKRSRPFA
FVALLPQRDQDSGYWGQGYGGLQSASEELSPLGIKTIFIEYDRYNPASFHDAVYQFNKLH
CDGLLLPPIMPEESRVFVESIQGKIPYIYYDADLPGTEPLCVIGQDAFRGGMLAGRLAQL
LACGKRGAFGILVAHQEDYHILRRRDGFYEYAHQHGLKVFQQQGVDLEHPEAASTLIKNL
LDTHEDLLGVFVTSASAHRIAEAAREIRKNNHFIIIGYDLVPENHRLLQEGALDAIISQR
PETQARRGLLQLYRAIVLGKSIPKREEIPLDLYLPENVPPYHREATTHR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaaaagaaattgcaaaactagcaggtgtttccatagggactgtcgaccgtgta
ttgcacggccggggccgagtttcacctgaaacgaaggccagaatagaagagataattaaa
aagtcaggatttacccccaatcctattgcccggggactgaagcggagccgtccctttgcc
tttgttgcactccttcctcaacgggatcaggattcgggatattgggggcagggttatggc
ggtcttcaatctgcctcggaggaactctcccccctgggtataaagactatttttattgaa
tatgatcggtataatccggcttcttttcatgatgcggtataccagttcaataaactccat
tgtgacgggcttctcctgccacccatcatgccggaagaaagcagggtctttgtagaatcg
atccaggggaagattccttatatttattatgatgcagacctgcccggaactgaaccgctc
tgtgttatcggtcaggatgcattccggggagggatgctcgctggccgtcttgcccagctt
ttagcctgcgggaaaaggggagctttcggaattttggtagcccatcaggaagattatcat
atcttacgacgccgggatggattttatgaatatgcccatcaacatggcctcaaggtgttt
cagcaacagggggtggatcttgaacatcctgaggctgcctcaacccttataaaaaatctt
cttgatacccatgaagatctgttaggggtctttgtaaccagtgcatcggcccaccgcatt
gccgaagccgcccgggaaatacgaaaaaacaaccactttattattattggatatgacctg
gtgccggaaaaccaccggcttctccaggaaggagctctggatgcaattatttcccagcgg
ccagaaacccaggcgcggcgtgggctcctgcagctctatcgggctattgtgctgggtaag
tctatcccgaaacgcgaagaaatccccctggatctctatcttcccgaaaatgtgccccca
tatcatagagaagcaacgactcacaggtga
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