Gracilinema caldarium: Spica_0118
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Entry
Spica_0118 CDS
T01573
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scd
Gracilinema caldarium
Pathway
scd00260
Glycine, serine and threonine metabolism
scd00460
Cyanoamino acid metabolism
scd00630
Glyoxylate and dicarboxylate metabolism
scd00670
One carbon pool by folate
scd00680
Methane metabolism
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
scd01120
Microbial metabolism in diverse environments
scd01200
Carbon metabolism
scd01230
Biosynthesis of amino acids
scd01240
Biosynthesis of cofactors
scd04981
Folate transport and metabolism
Module
scd_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Spica_0118
09102 Energy metabolism
00680 Methane metabolism
Spica_0118
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Spica_0118
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Spica_0118
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Spica_0118
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Spica_0118
Enzymes [BR:
scd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Spica_0118
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AEJ18286
UniProt:
F8EYC7
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All DBs
Position
complement(141021..142535)
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AA seq
504 aa
AA seq
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MQKNPVALYLSKTPPDKIDTALLAYLCNLQETAQVAPEIAASIVKELENQRKRVKLIASE
NYCSMAVQLAMGNLLTDKYAEGMPNHRFYAGNENVDAIESLAAEEACKVFGAEYANVQPH
CGADANLLAYWAILATRVEAPALEKYGETNLYKLTDEQWKELKTALGNQKLLGLDYYSGG
HLTHGYRYNVSARMFDVYSYTVSKETGLLDYDNIEKKALEIRPLILLAGYSAYPRKINFR
RMREIADKVGAVFMVDMAHFAGLVAGKVFTGDYNPIPFAHVVTTTTHKTLRGPRAGLVLS
TKEFAEALDKGCPLTMGGPLPHVIAAKAVAFREAGSPAFQDYAHRIVENSQALAAACMKG
GLEVLTGGTDNHLFLVNVRNLGITGRQAESALHECGITLNRNSLPFDPNGPWYTSGLRIG
TAAVTTLGMGNKEMEELGAIISLVLKGTKPTPDTKDPSKPSKAKYEVQADVKMEALKRVA
ALLSRFPVYPELDLELLKAAFVNT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaccctgtagccctgtatctgtctaaaaccccgccggataagattgataca
gccctgttagcctatctttgtaaccttcaggagaccgcccaggtcgcccctgaaatagcg
gcatcaatcgttaaagaactggaaaaccagcggaaacgggtaaaactcatcgccagcgaa
aactactgttccatggcggtccaacttgccatggggaacctgttaaccgataaatacgcc
gaagggatgccgaatcaccggttctatgcgggtaacgaaaacgtggatgccatcgaatcc
ctggcagcagaagaggcctgtaaggtcttcggagccgaatacgccaacgtccagcctcac
tgcggcgccgatgcaaacctccttgcctactgggccatccttgccacccgtgtagaagct
ccagccctcgaaaaatacggcgaaaccaacctctacaagctgaccgacgaacagtggaag
gaacttaaaactgccctgggaaaccagaaactgcttggcctcgactattattccggcgga
cacctgacccacgggtaccgctacaatgtctcagcccgaatgttcgacgtatacagctac
acggtttccaaagaaacggggctcttggactatgataatatcgagaaaaaggccctcgaa
atccggcccctcatactccttgcgggctattcggcatatccaagaaaaatcaatttccgc
cgtatgcgggaaatcgccgacaaggtcggcgcggtctttatggtcgacatggcccacttt
gccgggctcgtggcgggcaaggtctttaccggagactacaatcccatcccctttgcccat
gtggtaaccaccacaacccacaagaccctccgcggtccccgggcagggctcgtcctttcc
accaaagaattcgccgaagccctcgataagggctgtcccctcaccatgggcggccccctc
ccccatgtcattgccgccaaggcagtagccttccgggaagcgggatcaccagcgttccag
gactatgcccaccggattgtagaaaacagccaggccctcgccgcagcctgtatgaagggc
ggcctcgaagtgctcaccggcggcaccgacaaccacctcttcctcgtaaacgtccgtaac
ctgggcatcacaggccgccaggctgaaagcgcccttcatgaatgcggcatcaccctgaac
cggaacagcctcccctttgatcccaacggcccctggtacacctcgggcctccggattggt
accgccgcggttaccaccctcggcatgggcaacaaggaaatggaagagcttggggccatc
atcagcctggtgctcaagggaacaaaacccacaccggataccaaggatccctccaagccc
agcaaggcaaaatatgaggtgcaagcggacgtgaaaatggaagccctgaaacgggttgca
gccctcctttcccgcttcccggtctatccggaactggacctggagctcctcaaagcagcc
tttgtgaatacctaa
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