Gracilinema caldarium: Spica_0125
Help
Entry
Spica_0125 CDS
T01573
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
scd
Gracilinema caldarium
Pathway
scd02010
ABC transporters
scd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spica_0125
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spica_0125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_0125
Transporters [BR:
scd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spica_0125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
SgrA_ig-like
ABC_sub_bind
PucR
Motif
Other DBs
NCBI-ProteinID:
AEJ18293
UniProt:
F8EWQ7
LinkDB
All DBs
Position
147960..148913
Genome browser
AA seq
317 aa
AA seq
DB search
MKNNKIIGLFLFIILVIIMGFSIFLNVAKSMTSNRRVFGASYMTLVNPFFSVLDDGLREI
LEAHGDKLISYDAGNDQLKQIDQIQDFINKKVSAIFLNPVDLYLIEPALRSAKKAGIPII
NVDTPVYHQELVDCLVMSDNYKAGQLVAMDLLSRKQGARIALIDHLSAKSAMDRADGFKS
VISKYNAFNIVARYSSDGNIEQALSGMESILRDVPNIDVVFATNDPSAMGVIAALESAHL
LGKILVYGVDGAPYAKKMILESKMTATAAQSPVEIGRVAADMAYRIIKGEKVDKQIYVPI
YIINKENVNNYGINSWQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataataaaattatagggttattcttatttattattttagtaattataatgggt
ttttctatatttttaaatgtggcaaaaagcatgacgagtaatcgtagggtttttggtgct
tcgtatatgactttagtaaatccttttttttctgtacttgatgatggacttagagaaata
ttagaagcccatggtgataaattgataagttatgatgctggtaatgatcaattaaaacaa
atagatcaaatacaagattttattaataaaaaagtatcagcaatctttttaaatcctgta
gatttatatctgattgaaccggctttgagatccgcgaaaaaagctggaatacctatcatt
aatgtagatacacctgtgtatcatcaagaattggttgattgccttgtcatgtcagataat
tataaagcaggtcaactagttgcaatggatttactgagtagaaaacaaggtgcccgtatt
gcgcttatcgatcatctttctgcaaaatcagcgatggatagggctgatggatttaagagt
gttatttcaaaatataatgctttcaatatagttgcacgttattcttcagatggaaatatt
gaacaggctttatctggaatggaatctatattacgtgatgtaccaaatatcgatgttgta
tttgcgactaatgatccttctgctatgggcgttatagcagctctagagtcagcacattta
ttagggaaaatattagtctatggtgttgatggtgccccttatgcaaagaaaatgatttta
gagtcaaagatgaccgcaacagcagctcagtcacctgtagaaattggtagagttgcagct
gatatggcctatcgaattataaaaggagaaaaagttgataaacaaatatatgtaccgata
tatataatcaataaagaaaatgtaaataattatggaattaatagttggcaatga
DBGET
integrated database retrieval system
