Gracilinema caldarium: Spica_0156
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Entry
Spica_0156 CDS
T01573
Name
(GenBank) Phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
scd
Gracilinema caldarium
Pathway
scd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spica_0156
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scd01007
]
Spica_0156
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scd03016
]
Spica_0156
Enzymes [BR:
scd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Spica_0156
Amino acid related enzymes [BR:
scd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Spica_0156
Transfer RNA biogenesis [BR:
scd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Spica_0156
Prokaryotic type
Spica_0156
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B5
PhetRS_B1
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AEJ18324
UniProt:
F8EWT8
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All DBs
Position
complement(178920..180662)
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AA seq
580 aa
AA seq
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MPKIEVNEQLFYSLVGKRWLDRDAFEEALTCAKAELDEDSDKTQPEAERVLKIELNDTNR
PDLWSTAGVARQLRIHSGSGIPAYTFFSRPGAVQESKQYRVVVAPALKDIRPYIAAYVVS
GKAIDDSRLKDIIQTQEKLCWNFGRKRRSIAMGVYRTSLIKWPVQYTAADPDTTRFIPLG
MDEKLSLQEICEKHPKGQEYGYIVSSYKKFPYLTDAAGETLSFPPVINSARIGAVEVGDS
ELFVEMTGTDLESLTLAVNMTACDFADMGYTVHPVTVEYPYDTPFGRTLTFPYYFQKPTF
CSLKRIEKFLGEALSGPDCVAALQRMGCRAELAEDTEAGSSEKTMGLRVYPPEYRNDFLH
AADVVEDVMIGRTLPSFTPLKPRDFTIGRLTPITQFSRKVKELMIGLGYQEMIYNYLGSG
KDFIEKMCRDGSQIVRISNPMTENYEYVRDSVLASLMISESVSAHAVFPHKIFEVGKVAY
RDASENYGVKTRQHLGFVHAASDANFNTVASQLQALFYYLSREYEVEEVVDNRFIPGRAA
GIVYKGQRIGVFGEVHPQVLENWGITMPCTACEVDLDALL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagatagaagtgaatgaacaacttttttacagcctggtgggcaaacgctggctc
gatcgggatgcctttgaggaagctctgacctgtgccaaggcagaattggacgaagactct
gataaaacccagccggaagccgagcgggttttaaaaatcgagctgaatgatacaaaccga
cctgacctctggtctactgcaggggtggcccgacaattacggatccacagtggcagcggt
atccccgcctataccttcttttcccggcccggcgctgttcaggaatcgaaacagtaccgt
gttgttgtggcccctgccctgaaagatatccggccctatatcgcagcctatgtggtcagc
ggaaaagccattgatgacagccgccttaaggatattatccagacccaggaaaagctatgc
tggaattttggccgcaaacgccggtctatcgccatgggggtataccggaccagcttaatc
aagtggccggttcaatataccgctgctgaccctgacacgaccagattcatcccccttggg
atggatgaaaaactgtccctccaagaaatctgtgaaaaacaccccaaaggccaggagtac
ggctacattgtttcatcctataaaaagttcccctatctcaccgatgctgcgggggaaacc
ctctcgttcccgccggttatcaacagtgcccggattggggctgtggaagtaggtgattcg
gaactctttgtggaaatgaccggtacggacctcgagtcccttaccctggcagtcaacatg
actgcctgcgacttcgcagatatgggctatacggtccatccggtcaccgtcgaatacccc
tatgacaccccctttggcagaaccctcaccttcccctactatttccagaaaccgaccttc
tgttccctgaaacggatcgaaaaattcctcggcgaagctttaagcggccccgactgtgta
gcggccctgcaacggatgggctgtagggctgaactggcagaggacaccgaagctggttcc
agtgaaaaaacgatgggcctcagggtctatccgccggaataccggaacgacttcctccat
gcggcggatgtggttgaggatgtcatgatcggccgaactctgccatcctttacccccctg
aaaccccgggactttaccattggacggcttacccccatcacccagttctcccgcaaggtg
aaggaactgatgatcggccttggataccaggagatgatttacaactatctcggatccggt
aaggattttatcgaaaagatgtgccgggatggatcccagatcgtccggatcagcaatccc
atgactgaaaactatgaatatgtccgggattcggtgctggcttccctcatgatttccgaa
tctgtttcggcccatgcggtgttcccccataaaatttttgaagtaggcaaagtggcttac
cgggatgcctcagaaaactatggggtaaaaacccggcagcatctgggctttgtccatgcc
gcttccgatgctaactttaataccgtcgcaagccaactccaggccctgttctactatctt
tcccgtgaatacgaggtagaagaagtcgtggataacagatttattccaggccgagccgca
ggtattgtatataaagggcagcgtatcggggtctttggtgaagtacacccccaggttctg
gaaaactggggtatcaccatgccctgtaccgcctgcgaggtggatctggacgccctgtta
taa
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