Gracilinema caldarium: Spica_0302
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Entry
Spica_0302 CDS
T01573
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
scd
Gracilinema caldarium
Pathway
scd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spica_0302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_0302
Transporters [BR:
scd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spica_0302
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA
PHO4
TsaE
AAA_14
Zeta_toxin
AAA_18
DUF87
DO-GTPase2
AAA_16
AAA_28
AAA_30
RIFIN
AAA_24
AAA_33
AAA_15
T2SSE
AAA_29
nSTAND3
Rad17
AAA_23
Cpta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEJ18468
UniProt:
F8EZV5
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Position
343049..344953
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AA seq
634 aa
AA seq
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MSDQRQYINGQKSPAGTTRMMRPGQMMGRGGPMAMMKGEKAKNFKGTMLRLLSALAPYKM
RLSIVFLFAIASTVFSIIGPKIMGQATTVLLEGILAQFSGKGAIDFTKIATILLTVLALY
IVAALASFIMGWIMARVSTDLSYRFRKQIQAKINRIPFRYFDSTTHGETLSRITNDVDTI
NHTLNQSLTQIITSLVTVVGVLVMMLVIDWRMTLVALLMIPLSFLIIGFIVGKSQKYYKK
QQEYLGHINGQVEEMYGGHIVMKAFNREEKTLTTFDVTNETLYESAWKSQFLTGVMMPLM
NFVGNIGYVGVAVLGGWLAIKRAITVGDIQAFIQYVRNFTQPIQQIANISNILQQTAAAA
ERVYEFLDEEEETLETEHPVSLTEIRGEVEFRTIRFGYSKDKPIIKNFSALAKPGQKIAI
VGPTGAGKTTLVKLLMRFYDVDDGMILLDGYDIRTFRRSDLRKSFGMVLQDTWLYNDTIL
ENIRYGRLDATDDEVIAAAKAAYVDHFVHTLPEGYHMVLNEETSNISQGQKQLLTIARAI
LADPPIMILDEATSSVDTRTEVMIQKAMDRLMHGRTSFVIAHRLSTIQNADLILVLRDGD
IVEQGNHRELLNQNGFYAELYNSQFEVPATYEGI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaaagacaatatatcaatggacaaaaatcccccgctggaacgacaagaatg
atgcgtcctggccagatgatgggccggggcggacctatggcaatgatgaagggggaaaag
gctaaaaattttaaggggaccatgcttcgtctcctttcagccctggcaccttataaaatg
cgccttagcattgtctttctttttgcaatagcctccacagtatttagtatcattggtcct
aaaattatggggcaggctaccacagtacttttggaaggtatattagcacaattcagcgga
aaaggtgctatagactttacaaaaattgctactatactgctgaccgttttagcgctttat
attgttgccgccctggcttcttttattatgggttggattatggctagggtttccacagat
ctttcctaccggttccgaaagcagatccaggccaaaattaaccggatccccttccggtat
tttgatagtaccacacatggagagaccctgtcgcggattaccaatgatgtggataccatt
aaccacaccttaaaccagagtctcacacaaatcatcacatccctcgtaacagtagtgggt
gttcttgtaatgatgttagtgattgattggcgtatgaccctggtagccctccttatgatc
cccctttcgttcctcatcatcgggtttatagtcggaaaaagccagaagtattataaaaaa
caacaggagtatttgggtcatatcaatggtcaggtagaagaaatgtatggtggtcatatt
gtaatgaaggcctttaaccgggaggaaaagactctgaccacctttgatgttactaatgaa
accctctatgaatcggcctggaaaagccagttcttaaccggggtaatgatgcccctgatg
aactttgtcggaaatatcggctatgtgggtgtagcggtcctcggtggctggttggctata
aaaagggccatcactgtgggggacattcaagcttttattcagtatgtccgcaattttact
cagccgattcaacaaatagccaatatcagtaatatactgcaacagaccgctgcggcagca
gaacgggtttatgaattcctcgatgaagaggaggaaaccctagagacagagcatccagta
agccttaccgaaatccggggagaagtcgaattcagaaccatccgttttggatattccaag
gacaagcctatcattaaaaatttctctgcccttgccaagcctggccagaaaatcgctatt
gtcggtcctaccggggcgggtaaaacaacgctggtgaaactgctcatgcgcttttacgat
gtggacgatggcatgatcctcttggatgggtatgatatccggaccttccgtcgttccgat
cttcgaaagagctttggtatggttttacaggatacctggctctataatgataccattttg
gaaaacatccgttacggacgtctggatgcgaccgatgatgaggtgatagcagcggcaaag
gccgcctatgtggaccattttgttcataccctgcccgaaggctatcatatggtattaaac
gaagagacaagcaacatatcccagggacagaaacagctcttaaccatagcccgggccata
ttggccgatccgcccatcatgatcctggacgaagcgacgagctcggtagatacccgtacc
gaagtaatgattcagaaggctatggaccggcttatgcacggcaggacgagctttgtaatc
gcccaccggctttctaccatacagaatgcggacctgatccttgtgttacgggatggggat
atcgtggaacagggaaaccacagggaattacttaatcagaatggattctatgcggaactt
tataacagtcagtttgaagttcccgcgacatatgagggtatctaa
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