Gracilinema caldarium: Spica_0405
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Entry
Spica_0405 CDS
T01573
Name
(GenBank) preprotein translocase, SecY subunit
KO
K03076
preprotein translocase subunit SecY
Organism
scd
Gracilinema caldarium
Pathway
scd02024
Quorum sensing
scd03060
Protein export
scd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Spica_0405
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Spica_0405
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spica_0405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scd02044
]
Spica_0405
Secretion system [BR:
scd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Spica_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Pilin_N
Motif
Other DBs
NCBI-ProteinID:
AEJ18569
UniProt:
F8EX42
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All DBs
Position
448302..449621
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AA seq
439 aa
AA seq
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MATNPLVGIFRVKELRERVIFTMLMLIVFRLGAVLPIPGINVNALKAYFLSQQNTGNAIV
DYLDFFAGGAFTNFSVFMLGIMPYISMSIIMQLFLIIFPSLKKLSEEEGGRKKIQSYQRM
GTVVICLIQSYAVTVWADRIPNAITISKLSYTLIAMITVTTGTMFLMWIGEQITKRGIGN
GISLLIFAGIVARLPRAVWELVTKVKNRELNPVFMIVVFVMFIAVVALVVFEQQGQRKIP
VNYAKRVVGRKMYGAQNTYIPFKINPSGVIPVIFASSLLTFPLQIASGIGANVKWLADFS
RWLSPHGVAYNILYTLLIIFFAYFYTQVSLNPIEIAKNIRENGGSIPGIRTDKIEEYLMA
ILNRIILPGSLYLALIAILPTIIQTLFNFPASISYLMGGTSLLILVGVDLDTMSQVDALL
KMHHHDGLARKGHIRSRNL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaatcctttagtaggtatcttcagggtcaaagagctccgggaacgggtgatc
ttcacgatgctgatgctcatcgttttccgcctcggtgcggtactacccattccgggcatc
aacgttaatgcattaaaagcctattttctgtctcagcagaatacaggcaatgctattgta
gattaccttgatttctttgctggcggtgcttttacgaatttttcggtctttatgcttggt
attatgccctacatctccatgtcgatcataatgcagctgtttctcattatcttccccagt
cttaaaaagctttcggaagaagaagggggccggaaaaaaatccagagctaccagcggatg
gggactgtcgttatctgtcttattcagtcctatgcggttactgtttgggcagacaggatc
ccgaatgcaataactatatctaagctttcttataccctgattgcaatgataacggttacc
acgggaaccatgttcctcatgtggattggtgaacagattactaagcgggggatcggaaac
ggtatctcgctgttgatctttgccggtatcgttgcacgtctgccccgggcagtatgggaa
ctcgttaccaaagttaaaaatagagagcttaacccggtatttatgatagttgtctttgta
atgtttatagcagtagttgctctcgttgtttttgaacagcagggacaacggaaaattccg
gtgaactatgcaaaacgggtagttggacgaaagatgtatggtgctcaaaatacctatatt
ccttttaaaattaatccctctggtgttattccagttatttttgcatcatcgttattaacg
ttcccgttgcagattgcttccggtattggtgcaaatgtaaaatggctggctgatttttct
cggtggttaagtcctcatggggtagcgtataatattttatacacgctcctcattattttc
tttgcctatttctatactcaggtttcactgaatcctatagaaattgcgaagaatatacgt
gaaaatggcggctctatcccaggcatccggacagacaagatcgaagaatatttaatggct
attttgaatagaattattcttcctggatccttgtatcttgcattaatagccatcttgcct
acaattatccagacattgttcaattttcctgcctctatcagttatctgatgggtggaacg
tctttgttgattcttgtaggtgttgatctagataccatgagccaggtagatgcccttctt
aaaatgcatcaccatgatggtttagcaaggaaggggcatatccgttcaaggaatctatag
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