Gracilinema caldarium: Spica_0419
Help
Entry
Spica_0419 CDS
T01573
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
scd
Gracilinema caldarium
Pathway
scd00230
Purine metabolism
scd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Spica_0419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scd03009
]
Spica_0419
Enzymes [BR:
scd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
Spica_0419
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Spica_0419
Ribosome biogenesis [BR:
scd03009
]
Prokaryotic type
Other maturation factors
Spica_0419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
HD
ACT_4
RelA_AH_RIS
ThiI_fer
UreE_C
DUF5947
Motif
Other DBs
NCBI-ProteinID:
AEJ18583
UniProt:
F8EYK6
LinkDB
All DBs
Position
complement(458854..460890)
Genome browser
AA seq
678 aa
AA seq
DB search
MNSRIEEFKQKIQLYERPDQEKILAALEWAQSLHQDQKRASGEPYFIHPLGVASILVDLK
LDADTISAALLHDVLEDTATTGEAIEQKFNKDVRKLVEGVTKIADIHAKNKTLQEAENIR
KMLFAMVQDIRVILIKLADKLHNMRTLDYLPPERRKANAQDCLDIYAPLADRLGISWIKD
ELEDLSLKHLNRDVYDQIKGIVALKKKDRESFLNRVQEAILTETQKLGIEVVVNARAKHF
YSIYQKMRKRNKGPEELFDLFGIRILCNTVDDCYTLVGTVHHLWKPIEGRFKDYIAMPKS
NGYQSLHTTVMSFDGKLLEIQIRTKEMHQIAEYGVASHWLYKKGTTSEIIKPEDLSIVNR
LKDWNSLDMSTFLDDIKQELLKDSIFVFTPQGKVIELPAGSTPIDFAYHIHSAIGDHCAG
AKADGSIIPLTAELKNTQVVEILTTQNAHPHVNWLRAVKTAKARSKIRTWLQQNDETLII
DKNIVARKKSSPTSIPSQSTHQTQPIQTGQSATQKFEGAIQTVIQNQNISRNILQVKVED
ERNMMIRFAQCCKPVTGDPIIGYVSRGRGIIIHRNTCKNLHFIPDFEERKIEVEWEKVNS
QLVKRFKIEARKANDLFSAIEGAIRKHQGHLLEGRIEETSHDHFTGFFTLQLEHREDLKQ
VIKSLKNVPSVLHIQVIS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccgcattgaggaatttaaacaaaaaatacaactctatgaacgccctgaccag
gaaaaaatacttgcggcactcgaatgggcccaaagtctgcaccaggatcagaaacgggcc
tcaggagaaccctattttatccacccccttggagttgcatcaatcctggtagatcttaaa
ctggacgcagatactatttcagcagccctattgcacgatgtcctagaagatacggccacc
acaggcgaagcaatagaacaaaagtttaataaggatgtccgcaaattagttgagggggtt
actaagattgcggatattcatgcaaaaaataaaaccctccaggaagcagagaacataaga
aaaatgctctttgccatggtacaggatatccgggttatattgattaaactagcagacaaa
cttcataatatgcgaaccctggattatttgcctcctgaacgaagaaaggccaatgcccag
gattgtctcgatatttatgcccccctggcagaccggctcggtatatcctggattaaggac
gaactggaggacctttcactgaagcatctgaaccgggatgtgtatgatcagataaagggc
atcgtagccctcaagaaaaaggatcgtgaaagctttttaaacagagtccaagaagccatt
ctcaccgagacacaaaaactgggtatagaagtagtggtaaatgcccgggcaaagcatttt
tattcgatatatcaaaagatgcggaaacgcaataagggaccggaagaactctttgacctt
tttggcatccgaatcctctgtaatacggttgatgactgctatacgctagtcggaactgtg
catcatctctggaagcctatagaagggcgctttaaagattatatcgccatgcccaaatcc
aacggctaccagagcctacacacgacggtgatgagctttgatggtaagttactagaaata
cagattagaaccaaggaaatgcatcagatcgccgaatatggtgttgcaagccactggctt
tacaagaagggtactaccagtgaaattattaaacctgaggatctttccattgtaaaccgt
ctcaaggactggaacagcctcgatatgtctactttcctggatgatataaaacaggaactg
ctaaaggattcaatctttgtgttcactccccagggaaaggtaatagaactaccagcgggg
tccacacctattgattttgcataccatatccattcagccatcggggaccactgcgcggga
gcaaaagccgacgggagcatcataccgcttactgcagaattaaaaaacactcaggtggtc
gaaatccttaccacacagaatgcccatccccatgtaaactggctccgggccgtaaaaacc
gcaaaagcccgaagcaaaatccgtacatggctccagcagaatgatgaaaccctcatcatt
gataaaaacattgttgcacggaaaaagagcagtcctacctccataccatctcaatcaact
catcaaactcaacctatacagactggccaatcagctacgcagaaattcgagggggccata
caaactgttattcaaaatcaaaacatctccaggaatatattgcaggttaaggtcgaagac
gagcggaatatgatgatccgcttcgcccaatgctgtaaaccggtaactggggaccctatt
atcggctatgtttcacggggcagaggaatcatcattcatcgtaatacctgtaaaaattta
cactttatccccgacttcgaagagcgaaaaatagaagttgaatgggaaaaggtcaattca
cagctggttaaacgctttaaaattgaagcacgtaaagcaaatgatctattctcagcaata
gaaggggcaattcgcaagcatcaggggcatctgctggaaggaagaatagaagaaaccagt
catgatcatttcaccggatttttcacattacaattagagcaccgggaagacttaaaacag
gtcatcaaaagcctgaaaaacgtcccctcggtacttcacattcaggttatatcataa
DBGET
integrated database retrieval system