Gracilinema caldarium: Spica_0508
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Entry
Spica_0508 CDS
T01573
Name
(GenBank) DegT/DnrJ/EryC1/StrS aminotransferase
KO
K13010
perosamine synthetase [EC:
2.6.1.102
]
Organism
scd
Gracilinema caldarium
Pathway
scd00520
Amino sugar and nucleotide sugar metabolism
scd00541
O-Antigen nucleotide sugar biosynthesis
scd01100
Metabolic pathways
scd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Spica_0508
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Spica_0508
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scd01007
]
Spica_0508
Enzymes [BR:
scd01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.102 GDP-perosamine synthase
Spica_0508
Amino acid related enzymes [BR:
scd01007
]
Aminotransferase (transaminase)
Others
Spica_0508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Aminotran_1_2
SepSecS
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AEJ18670
UniProt:
F8F017
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All DBs
Position
552714..553862
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AA seq
382 aa
AA seq
DB search
MEKFKTIIDFIKTLYPNENPVPLHAPRFLGNEKKYLAECVDTTFVSYVGKFVTDFEDHIK
RITGSPYAAAFVNGTAALQIALIASGVQPDDEVITQALTFAATSAAICHAGANPVFIDVE
PDTLGMSPDALSKFLSNHAETKNGFVVNKKTGKRIAAVVPMHTFGHPVRIDEISEICKSY
GILLIEDAAESLGSYYKGKHTGTYGSAAILSFNGNKPVTTGGGGMIISNDEALIEKARHL
STTAKRKHPWEFFHDEIGFNLRLPNVNAALGCAQMEYFDTIIANKRETALKYKEFFTNNG
IQFFTEPHNSVSNYWLNVIMLNDRAERDSFLEYSNSQGIQTRPVWKLIPTLPPYQKYQCM
EIPVAKMLEDKIVNIPSSVRAE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttaaaacaatcatagactttataaaaacactgtatccgaacgaaaatcct
gttccattgcatgcgccgcgttttttgggcaatgaaaaaaaatatcttgcagaatgtgtg
gatacaacatttgtttcttatgttgggaagtttgtaacagattttgaagatcatattaaa
cgcataacaggtagtccgtatgctgcggcttttgttaatggcacagcagcattgcaaata
gcgcttattgcctcaggtgtacagcctgatgatgaagttataactcaagctttgaccttt
gcagctacttctgctgcaatttgtcatgcaggggctaatcctgtttttattgatgtagaa
ccggatacccttggaatgagtcctgatgcgctttcgaagtttttatcaaatcatgcagaa
acaaaaaatggtttcgtagttaataagaaaaccgggaaaagaattgccgcagttgttcca
atgcatacttttggacatcctgtaagaatcgacgaaatttctgaaatatgtaaatcatat
ggtattctgcttatagaagatgcagcagaatcattaggttcatattacaagggtaaacat
acaggaacgtatggttctgcagcaattctttcatttaatggaaataagcctgtaacaaca
ggcggcgggggtatgattatttccaatgatgaagcgctcatagaaaaagcaaggcattta
agtacaaccgcaaagagaaagcatccctgggaattttttcatgatgaaattggttttaac
ctccgtttgcctaatgtgaatgcagctttgggttgtgctcaaatggaatattttgataca
atcattgcaaacaagcgtgaaactgccttaaagtataaagagttttttactaataatggt
attcaatttttcaccgagccgcacaattctgtgtcaaattattggctcaatgtgataatg
cttaacgacagggcagagcgagatagtttccttgaatacagcaacagccagggcattcaa
actcgtccagtatggaagcttataccaaccttgccaccttatcaaaagtatcagtgtatg
gaaatacctgttgcaaaaatgcttgaagataaaattgtgaatatacctagtagtgtgaga
gcagaatga
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