Gracilinema caldarium: Spica_0561
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Entry
Spica_0561 CDS
T01573
Name
(GenBank) Seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
scd
Gracilinema caldarium
Pathway
scd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spica_0561
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scd01007
]
Spica_0561
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scd03016
]
Spica_0561
Enzymes [BR:
scd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Spica_0561
Amino acid related enzymes [BR:
scd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Spica_0561
Transfer RNA biogenesis [BR:
scd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Spica_0561
Prokaryotic type
Spica_0561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FapA
PHM7_cyt
Motif
Other DBs
NCBI-ProteinID:
AEJ18721
UniProt:
F8F068
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All DBs
Position
complement(609333..610610)
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AA seq
425 aa
AA seq
DB search
MLDYRFIKDNLEAVKENIRNRNMKADADKVAMLFDTRNELVTQLQNLQQQRNTNAQAMKG
KLDADTRNRLIEEGKKLKEDIAAAEAELEQVEKELDTEGRRIPNMAHPSAPIGKEDKDNL
EVKRVGNPTTFNFEPKDHVQLGQELDIIDFDSATKVTGTKFYYLKNEGVFLELGLIRYAL
DILQKKGFTPFITPDLAKEEILEGIGFNPRGAESNVYTVEGEGTCLVGTAEITLGGYYSG
TILSKDKLPLRMAGLSHCFRREAGAAGQFSKGLYRVHQFTKVEMFAYCLPEESDALHEEL
RSIEEEIFAGLEIPFRVVDTCTGDLGAPAYRKWDLEAWMPGRNGGEWGEVTSTSNCTDYQ
ARRLNIKYKEEDGKNKYVHMLNGTAIAISRGIIAILENFQQADGSVRLPKALVPYCGFEV
IKKKQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttagattatcgattcattaaggacaacctggaagcggtgaaggaaaacatccggaac
cgtaatatgaaagcagacgccgacaaggtggccatgctttttgatacacggaacgagctg
gtgacccagcttcagaatcttcagcaacaacggaataccaatgctcaggccatgaagggt
aagctcgatgcagatacccggaaccggcttattgaagagggcaaaaaacttaaagaagat
atcgccgctgccgaagcagaactggaacaggtagaaaaggaactggatacagaaggccgc
cgaattcccaacatggcccatccatcggcacccatcggcaaagaagataaggataacctg
gaagttaaacgggtgggaaatcccacaacctttaatttcgaacccaaagaccatgttcag
ctggggcaggaactggatatcatcgattttgattccgccaccaaggttacgggcaccaaa
ttctattatcttaagaatgaaggggtcttccttgagctgggcctgatccgctatgccctg
gatattctgcagaaaaaaggttttaccccctttatcaccccggaccttgccaaggaagaa
atccttgaaggtatcggttttaatccccggggggctgaatccaatgtttacaccgtagaa
ggcgaagggacctgccttgtaggcaccgccgaaattaccctggggggctactattcgggt
accattctcagtaaggataagctccccctcaggatggccggactttcccactgtttcaga
cgggaagctggtgccgcgggtcagttttccaaagggctgtaccgggttcaccagtttacc
aaggtcgagatgttcgcctactgtctccccgaagaatcggacgccctccacgaagaactg
cgttctatagaagaggaaattttcgcaggcctcgaaattcccttccgggtagtggacacc
tgtaccggtgacctgggagccccagcgtaccgcaagtgggacctggaagcctggatgcct
ggtcggaatggcggcgaatggggagaagtaacttctacctctaactgtaccgattaccag
gcccggcggctcaacataaaatacaaagaggaagacggtaaaaataaatatgtgcacatg
ctaaacggcaccgccattgccatcagccggggcattatcgcaattctcgagaatttccag
caggctgacgggtctgttcgcctacccaaagccctggtcccctattgcggcttcgaagtc
atcaagaaaaaacagtaa
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