Gracilinema caldarium: Spica_0709
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Entry
Spica_0709 CDS
T01573
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
Organism
scd
Gracilinema caldarium
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
Mg_chelatase
AAA_16
HTH_8
AAA
AAA_7
AAA_2
MCM
Motif
Other DBs
NCBI-ProteinID:
AEJ18863
UniProt:
F8EXC0
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Position
775534..777036
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AA seq
500 aa
AA seq
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MVGESLVMDSSRVLEIILQALRELVEYELAVILKYDGQEHLRVIKALGPLSTRALNNYTI
SLDERPDLAAVITRKRAHLFSPDEPHVDTYADILDLPDQHSCLVSPLMIEDELVGLLTLD
HRSCNRFSPAIVRFVETLSKLMSIALIQLDMSRDLAEQNSRLLQERNQLLLSESDVFSHL
VGESTEWQRVLDSVKLVASATVPVLLQGETGTGKEEIARAIHRLSPRARGPFVPLNCSAL
TASLAESELFGHEKGAFTGALALKRGRFELAHGGTLFLDEIGDLPLELQPKLLRALQEGV
FERVGGEKPVQVDVRIIAATHVDLQQAVAAGTFREDLYYRLAVFPIELPPLQLRSADILL
LADYFLRRIRERSNRQVLSFSPEALDKIQRYTWPGNVRELKNVIERASILAVDGIIRPEH
ITGLRTEALEPASRCEEAGSHDGEGSDGRKRSLNEAMADHIRQALKACGGKIYGSDGAAA
LLGLKPSTLQSRMKKLGIRK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtgaatctctggtgatggacagttcccgggttctggaaattatcctgcaggcc
ttacgggaactggttgaatacgagctcgcggttatcctgaaatatgacggccaggagcac
cttcgggttataaaagccctggggcccctttccacgagagccctcaacaactacaccatc
tcccttgatgaacggccggatcttgcggcggtcattacccgaaaacgggcccatcttttt
agccccgatgagccccatgtggatacctatgcggatattctggatctgccggaccagcat
tcctgtctcgtttcacctttaatgatcgaagacgaactggtgggtcttttaacgctggat
caccggtcatgtaatcgcttcagtccggctattgtccgctttgtggaaaccctttccaaa
ctcatgtcgattgctctcatccagctggatatgtcccgcgacctggcagaacagaacagc
cggcttttacaggaacggaaccagctcctgctctctgagtccgatgtcttttcccacctg
gttggggaatctaccgaatggcagcgggtattggattcagtgaagctcgtggcaagcgcc
accgtgccggtcctgctccagggtgaaaccggtaccggaaaggaagaaattgcccgggct
atccaccggctctctccccgcgccaggggtccctttgtaccgctgaattgctccgccctg
acagccagcctcgccgaaagtgaactctttggtcatgaaaagggtgcctttaccggcgcc
ctggcgcttaaacggggccgttttgagctcgcccatgggggtaccctttttctcgatgaa
attggagacctgcccctggaactccagcccaagttactgagggccctgcaggagggggtt
tttgagcgggtgggcggagaaaaaccggtccaggtagatgtccgtattattgcagcgacc
catgtggatttacaacaagcggtagcggccggtactttccgggaagacctctattaccgt
ctcgcagtgttccctatagaactgccacccctgcaactccggtccgcagatatcctcctc
ctggccgattatttcctgcggagaatccgggagcgttcaaaccgacaggtcttaagcttc
agtcccgaagcgttagataaaatacagcggtatacctggccggggaatgtgcgggagcta
aaaaatgtcattgaacgggcaagcatcctcgcggtagatggcatcatccggccggagcac
ataacgggcctcagaaccgaggcgttggagcctgcttcccgatgcgaagaggctggctcc
catgatggtgagggctccgatggccgaaagcggtccctgaatgaggccatggcagaccat
atccggcaggcccttaaggcctgcgggggtaaaatctatggttccgacggcgccgcagcc
cttttggggcttaagcccagcaccctccagagccggatgaaaaagctaggaattaggaag
tag
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