Gracilinema caldarium: Spica_0835
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Entry
Spica_0835 CDS
T01573
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
scd
Gracilinema caldarium
Pathway
scd02010
ABC transporters
scd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spica_0835
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spica_0835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_0835
Transporters [BR:
scd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Spica_0835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
DUF7362
Motif
Other DBs
NCBI-ProteinID:
AEJ18989
UniProt:
F8F0C5
LinkDB
All DBs
Position
920809..921969
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AA seq
386 aa
AA seq
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MKKRFGLILVTALALSLVTVLVSCGGKAQSDVIKIGVFEPLTGANGAGGADEAEGVKLAN
LLYPTVTVGGKEYKIELVVADNKSDKVEAANAATMLAQKAKVNAVIGSWGSSLSMAGGPI
FAEAKIPAVGASCTNPNVTKGNEYYFRVCFIDPFQGDVMANYAFKNLGAKKAAIIREVSN
DYSVGLAKFFMDSFIKLTGDPNAIVAQADYNTNDQDFNAQLTNIKKAKPNVIFAPGNFTE
SALLIKQARQQGITTPFLGGDTWDEAAFLEVGGKEVEGAVFSTFFANDVPINGTSAVFLK
EFRAKFNKEPAAVAALGFDAYLVILDAIKRANSVDPVKIRDEIAKTTNFEGAAGSISINA
DRNAEKDAVIKVVKDGKFQYLTTVKP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcgttttggtttaattttagttacagccttagcactaagcctcgttacagtc
ttggtgagctgcggcggaaaagcccagtcggatgtcatcaaaattggtgtatttgaaccc
ttaacgggagccaatggtgccggtggtgccgatgaagcagagggtgtcaagctggcaaac
ctgctctatccaactgttactgttggtggcaaggaatataaaattgaacttgtggtagca
gacaacaaatctgacaaggtggaagcggccaatgcagccaccatgctggcccagaaagct
aaggtgaatgcagtgatcggaagctggggttcttctctttccatggctgggggccccatt
tttgcggaagccaaaatccccgcagttggtgcttcctgtaccaatcccaacgtgaccaaa
ggcaatgaatattacttccgagtttgttttatcgaccccttccagggtgatgtcatggcc
aactatgcctttaagaatctaggcgcaaaaaaggctgccattatccgtgaagtgtccaat
gattattcggtcggactggctaaattctttatggatagtttcatcaaactgaccggggat
ccgaatgctatcgttgcccaagcagactataacaccaatgaccaggactttaatgcccag
cttactaatatcaaaaaagctaagcccaatgtcatttttgctcccggtaactttactgaa
agtgccctgctcataaaacaggcccgccagcagggtatcaccactccgttcctgggcggt
gatacctgggatgaggctgccttcctggaagtaggcggcaaggaagttgaaggggcggtg
ttttccaccttcttcgccaatgatgtgccgatcaatggcaccagtgcggtcttcctaaag
gaattccgggctaagttcaataaagaacccgccgccgttgctgcccttggtttcgatgcc
tacctggtcatccttgatgcaattaagcgggccaattcggtagatccggtaaagatccgg
gatgaaattgccaaaaccacgaacttcgaaggggccgctggttccatcagtatcaatgcg
gatcggaatgccgaaaaggacgcggttataaaagttgtaaaggacggaaaattccagtat
ctgaccacggtaaagccataa
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