Gracilinema caldarium: Spica_0896
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Entry
Spica_0896 CDS
T01573
Name
(GenBank) glycyl-tRNA synthetase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
scd
Gracilinema caldarium
Pathway
scd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spica_0896
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scd01007
]
Spica_0896
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scd03016
]
Spica_0896
03029 Mitochondrial biogenesis [BR:
scd03029
]
Spica_0896
Enzymes [BR:
scd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Spica_0896
Amino acid related enzymes [BR:
scd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Spica_0896
Transfer RNA biogenesis [BR:
scd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Spica_0896
Mitochondrial biogenesis [BR:
scd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Spica_0896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Zn-ribbon_8
zf_Rg
zinc_ribbon_15
HypA
DUF5886
YhfH
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AEJ19050
UniProt:
F8F1J7
LinkDB
All DBs
Position
987711..989102
Genome browser
AA seq
463 aa
AA seq
DB search
MAEQQNEYQGKATMEKITSLAKRRGFVFQSSEIYGGQAGAWDYGPLGIELKNRIAQTWWK
EMTQLHDDIVGLDAAILMHPRVWEASGHVENFTDPLVDCKKCKARFRADQIDPEKLAKKE
CPECGGELTDTRKFNLMFKTNIGAVEDSSSVIYLRPETAQGIYVNYKNIIQSNRMKIPFG
IAQIGKAFRNEIVTKNFIFRTCEFEQMEMQFFVKPGTDEEWFNTWRDRRWKYYEKLGVKM
DHLRWHRHGPDELAHYAKDAYDIEYLFPMGWKELEGVHNRSNYDLSRHMQFSGKDLQYID
QDNGNERYIPFIIETSAGLTRSLLMLLCDAYDEEYVGTGDPATSDKNSDDWRTVLRFHPN
LAPITVAVLPLMKKDGLAELAQDIRAELKEDFATDYDQSGAIGRRYRRQDEAGTPFCVTI
DYQSKEDNTVTLRFRDSMEQVRVHRSELVQRIRAEIKNYKRTK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacagcaaaacgagtatcaaggcaaggctaccatggagaaaatcacgtccctc
gccaagcgacgtggttttgtgtttcaatcgtcggaaatttacggcggccaggcaggcgct
tgggactacggtcccctgggcatcgaactgaaaaaccgtatcgcccaaacctggtggaag
gagatgacccagcttcatgatgacatcgtcggtctcgatgcggccatccttatgcacccc
cgggtatgggaagcctccggtcacgtcgaaaacttcaccgaccccctggtggactgcaaa
aagtgtaaagcccgcttccgggccgaccagattgatcccgaaaagcttgctaaaaaggaa
tgtcccgaatgcggcggcgaactgaccgatacccgcaagtttaacctcatgttcaaaacc
aacatcggcgccgtagaagacagctccagcgttatctacctgcgccccgaaaccgcccag
ggcatctatgtaaactataagaacatcatccaatccaatcggatgaaaatccccttcggc
attgcccagataggcaaggccttccggaacgaaatcgtcaccaaaaacttcattttccgc
acctgcgaatttgagcagatggaaatgcagttctttgtaaaacccggcaccgatgaggaa
tggttcaacacctggcgggaccgccgctggaaatattatgaaaaactgggcgtaaaaatg
gaccacctccgctggcaccgccacggtccggacgaactggcccactatgccaaggacgcc
tacgatatcgaatacctcttccccatgggctggaaggaactcgaaggggtccacaaccgc
tccaactacgacctgtcacggcatatgcagtttagcggcaaggacctgcaatacatcgac
caggacaacggcaacgaacggtacatccccttcatcatcgaaacctccgcgggcctcaca
agaagcctcctcatgctcctctgcgacgcctacgacgaagaatacgtcggcaccggagac
ccggccacctcggataaaaactccgacgactggcgcacggtcctccgtttccaccccaac
ctggcccccatcaccgtggcggtcctccccctcatgaagaaggacggtctggctgaactc
gcccaggatatccgggccgaactcaaggaagacttcgccaccgactacgaccagtctgga
gccatcggccgccgctatcgccgccaggacgaagccggcacccccttctgtgtcaccatc
gattaccagtccaaagaggataacacggttaccctccgtttccgggactccatggaacag
gttcgggtgcaccgctctgagctggtccagcgaatccgcgcagaaattaaaaactacaag
cgcactaaataa
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