Gracilinema caldarium: Spica_0954
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Entry
Spica_0954 CDS
T01573
Name
(GenBank) Integrase catalytic region
KO
K07497
putative transposase
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Spica_0954
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GFIT
Motif
Pfam:
rve
rve_3
HTH_21
rve_2
rva_4
HTH_Tnp_Tc3_2
DDE_Tnp_IS240
Fungal_virus_P2_N
Motif
Other DBs
NCBI-ProteinID:
AEJ19104
UniProt:
F8F232
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Position
complement(1049412..1050254)
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AA seq
280 aa
AA seq
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MEPDYPDLSIREQCRILGITRASYYYKAVEKDEDRDLAILNAILEELKVHPFYGYRKIAR
ALADMGVTRKQVRRIMHKAGLRAIYPKKRTSIRSKGHKKYPYLLKNMVLWIPNQVWATDI
TYIKLGKGFVYLVVILDLYSRKILSWKVSNTMDTDFCVASLEESIKQWGIPAIFNTDQGS
QFTSEAFISVLESYGIRISMDSKNRALDNIYMERVWRTIKYEDIYIKDYQTMTELKEGLK
TYVTFYNSKRYHQSLDYATPDEIYAQAFRSTLPLEEALTA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atagaaccggactatccagacttatcgatacgagagcaatgccgaatactgggaataact
cgagcaagttattactacaaggccgtagaaaaggacgaagatagagaccttgccattttg
aatgccatcctggaagagctcaaagttcacccgttttatgggtatcgcaaaatagctcgt
gccttagcagatatgggggtaacacggaaacaggtgcgtcgtatcatgcataaagctggt
ttacgggccatatatcccaaaaaacggaccagtattcgctctaaagggcataaaaagtac
ccctatctgcttaaaaacatggtgctttggattcctaaccaggtctgggcgacggatatc
acctacattaagctcggtaaaggctttgtgtacctggtggtcatactcgacctgtattct
cgtaagatattgtcctggaaggtctcaaataccatggatacggacttttgtgtagcttcc
cttgaagaatcaatcaaacagtggggaatcccggctatcttcaatacggatcaggggagt
cagtttactagcgaagcgtttatttcagtccttgaatcgtatggcattcgtatcagtatg
gatagcaaaaatcgagctcttgataatatttacatggaacgggtctggcgtaccatcaag
tatgaagatatttatatcaaagactatcaaaccatgactgaactcaaggagggactaaaa
acctatgtaactttttacaacagtaaacggtaccatcaatcgttggactatgctacacca
gatgaaatctatgctcaggcatttagatctaccctaccattagaggaggctctcactgct
tga
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