Gracilinema caldarium: Spica_1032
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Entry
Spica_1032 CDS
T01573
Name
(GenBank) sodium ion-translocating decarboxylase, beta subunit
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
scd
Gracilinema caldarium
Pathway
scd00620
Pyruvate metabolism
scd00650
Butanoate metabolism
scd01100
Metabolic pathways
scd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Spica_1032
00650 Butanoate metabolism
Spica_1032
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Spica_1032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_1032
Enzymes [BR:
scd01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Spica_1032
Transporters [BR:
scd02000
]
Other transporters
Primary active transporters [TC:
3
]
Spica_1032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
AEJ19181
UniProt:
F8EXF4
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All DBs
Position
1137466..1138854
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AA seq
462 aa
AA seq
DB search
MLNMNKNPKRVTMIVLAMITVAFAFSFMGTVLAQSESTTVPSQGYASWSNPDGIIKGSEN
IPRISIASFARNILETTGISAFINDAREMVTPAGEKTTVFGWQELLMVIVGFVIIYLGAA
KGFEPLLLIPIGFGTVFVNIPFGGMGDAPHGFLNIIYEAGVGNEFFPLIIFMGIGALTDF
GPLIANPKTALLGAAAQFGVFGTLFGITAFNLIPGFNFTMKEACSVAIIGGADGPTTIYI
AAKLAPHLLATVAVAAYSYMALVPVIQPPIMRALTTPAERKIRMKQLRHVSKVEKMLFPL
SVFILSILLIPSASPLIGCLMFGNFIREIGVVERLSKTLQNELLNIVSIFLSLGVGSQMT
PEKFLNPASLSIVFMGLMAFAIATASGILVAKFMNLFLKEKINPLIGSAGVSAVPMAARV
SNRVGLEEDPGNFLIMHAMGPNVAGVIGTAIAAGVMIAVYGG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatatgaataagaacccgaagcgggtaactatgattgtgcttgccatgatcacc
gttgcctttgccttctcctttatggggaccgtgctggctcaatctgaaagtactacggtt
ccgtcacagggatatgcttcatggagtaatcccgatggaattattaagggcagcgaaaat
attccgagaatttccatcgcttcctttgccaggaatattctagaaaccaccggtatttct
gcttttatcaatgatgcccgggaaatggtgacccctgcgggtgaaaagaccaccgtcttt
ggctggcaggaactgctaatggttattgtgggctttgtgatcatctacctgggggctgcg
aagggctttgaaccgctcctccttattcccatcgggtttgggacagtctttgtaaatatt
cccttcggtggtatgggggatgctccccacggtttcttaaatattatttatgaagctggt
gtaggaaacgaatttttccccctgatcatctttatgggtatcggtgccctcactgacttt
gggccccttattgcaaaccccaaaaccgcattgcttggagctgcagcacagtttggtgta
tttggtaccctcttcggtattacggccttcaatcttattcccggctttaactttaccatg
aaggaagcctgttctgtagccattattggtggtgccgatggccctacaacgatttatatt
gcagccaaactagccccgcaccttctggcaaccgtcgcggttgccgcttactcctatatg
gccctggtaccggttatccagccgcccatcatgcgggccctgaccactccggcggaacgg
aaaattcggatgaaacagctccggcatgtatcaaaggtggaaaagatgctcttccccctt
tcggtatttatcctttccattctgctcatcccgtctgcttctccgctcattggctgtctc
atgtttggtaactttatccgcgagattggggtggtggaacggctttccaagactcttcaa
aatgagcttttgaacatcgtttccatcttcctctccctgggtgttggtagccaaatgacc
cctgagaaattcctgaaccccgcatccctttctatcgtgtttatgggacttatggccttc
gcgattgctactgcttccggtatccttgtggctaagtttatgaatcttttccttaaagag
aagattaatcccctcatcggttcggctggtgtatctgccgttcctatggctgcccgggtt
tccaacagggttggtcttgaagaagatccggggaacttccttattatgcatgccatgggc
cccaatgtggccggtgttatcggtactgcaattgctgcgggtgttatgattgctgtctat
ggcggctga
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