Gracilinema caldarium: Spica_1151
Help
Entry
Spica_1151 CDS
T01573
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scd03016
]
Spica_1151
Enzymes [BR:
scd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Spica_1151
Transfer RNA biogenesis [BR:
scd03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Spica_1151
Prokaryotic type
Methylthiotransferases
Spica_1151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
AEJ19297
UniProt:
F8F0F3
LinkDB
All DBs
Position
1298777..1300207
Genome browser
AA seq
476 aa
AA seq
DB search
MLSVCFHTLGCKLNQLETESIAESFKKEGFALVDWGDAADIFVINTCTVTSKAEQKARRM
IRKALRDNPAACLIATGCYAQLDGKALESLASDGRIFVVSGDLKSVLLDLPAYLMDNGCT
SVNVIPLMHRWILDWYGTQETSGAVPPQSVDPFRFNVQDYSFHSRAFLKIQDGCNNACAF
CRVRLARGRSVSLSAPLVLERLQQLEAHGFAEVVLTGVNLNQYKDGAMDFTALLEYLLGG
TKSIALRISSTEPEGVDERFSAVFAHPRIRPHIHLSVQSGSDRILQKMRRRYRAEKVKKA
VELLRQAKGDPFIACDIITGFPGETDDDFAETYELCKQLDFSWIHAFPYSPRPGTEAYTM
QDRVSETVSGQRLDRLLKLAEEGKAAYITRWIGKKVSAIVEHNHSDNGFVVVTDNYLKAW
IPLGAGLSHPTAKKSITCTIQRAIDSVDPINDIPHDSIDVVARCLDTQYNTFYGYT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcgtttgctttcataccctgggctgtaaactgaaccagctcgaaaccgaatcc
attgccgagtcctttaaaaaggaaggctttgccctggtagattggggtgatgctgctgac
atttttgtaattaatacctgtaccgtaacgagtaaagcagagcagaaggcccgtcgcatg
atccgcaaagctctcagggacaatcctgcggcctgtctcattgcgacgggatgttatgcc
cagctggacggcaaggccctggaaagcctcgcttcggatggccgtatctttgtcgtttct
ggggacctaaaatcggttctgctcgatctgccggcttacctcatggacaatggttgtaca
tcggttaatgtcatccccttgatgcaccgttggatattggattggtatgggacccaggaa
acgtcgggagctgttcctcctcaatcggtagaccccttccgttttaatgtacaggactat
tcctttcatagcagagctttccttaaaatacaggatggatgtaacaatgcttgtgccttc
tgtcgggttcggcttgcccggggccgcagcgtaagtttatctgcaccgctggttttggaa
cggctccaacagttggaagcccatggttttgccgaagtggtgctcaccggtgtgaatttg
aatcaatataaagatggagcgatggattttaccgccctgctggaatatctactcggagga
accaaaagcatcgccctgcgcatttccagtaccgagccagagggggttgatgaacggttt
tcagcagtttttgcccatccccggatacggccccatatccatctttcggtgcagtccggc
agtgatcggattttacagaaaatgcgtcgccggtaccgggcagaaaaggtgaaaaaagcg
gtggaattactgcggcaggcgaagggggacccctttattgcttgtgatatcattactggt
tttcctggtgaaaccgatgatgactttgcagagacctatgaactgtgtaaacagctggat
tttagttggatccatgcttttccctattcaccccggcctggaaccgaagcctatacgatg
caggaccgggtcagcgaaacggtctcagggcaacggttggaccggcttctgaaactggct
gaagagggaaaggctgcttacataacgcgctggatcggaaagaaagtgtcggccattgta
gaacacaatcatagcgataatggctttgtggtggttaccgataattatttaaaagcttgg
attcctcttggggctggattgtcccatcccaccgccaagaagagcattacctgtacaata
caaagggctattgattctgttgaccctataaatgatatcccccatgatagtatagatgtt
gtagctcgatgtttagatacgcagtataacacgttttatggatatacatga
DBGET
integrated database retrieval system
