Gracilinema caldarium: Spica_1193
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Entry
Spica_1193 CDS
T01573
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
scd
Gracilinema caldarium
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Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_16
AAA_19
Mg_chelatase
HTH_23
HTH_30
FleQ
GlnR_1st
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEJ19339
UniProt:
F8F0J5
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Position
1343009..1344421
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AA seq
470 aa
AA seq
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MPHYPETQQAFKILIIDDEKNLRDSIAAYLESEGMEAQTAASGEAGKLLMETERFDAVVV
DLKMPGMSGLDFLSWLKDGGPLIPAIMISAHGDIKDAVEAMKRGAADYLVKPFNPDELVV
RLRMVVGNARLVATASAMQTVADKKNRKSLSGVDPDWIGSSPAMQEVRSLVERVAPTDST
VLVTGESGTGKEVVARLIHRLSKRADGPFIPINMGGIPENLIESELFGYEKGAFTGADSR
KTGLCELASGGTLFLDEVGDMPLPLQVKILRMLQEKKIMRLGGSRQIPIDVRIIAATNKD
LEQAVKQGVFREDLFYRLAVIRLRLPPLRDRREDIPILAQLFVDRYAAEMGRPSLKLGTD
ALELLSRYSFPGNVRELENAVERAVILCEGSELHSRDFSFAGSAMDKAPPPGSFAGDALA
GEVKTLEELERAAILRTLALYQGHREKTAQALGITRRTLLNKLKEYQIEG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctcactatcctgaaacacaacaagcttttaaaattctcatcattgatgatgaaaaa
aatctacgggattctattgctgcataccttgagtcagagggtatggaagcccagactgct
gcctccggagaagcggggaaactgcttatggaaaccgagcgcttcgatgcggtggtggtg
gacttaaaaatgcccggaatgtcaggcctcgattttctcagttggcttaaagatggcggc
ccccttatcccggcgattatgatcagtgcccatggggatattaaggatgcggtagaggcc
atgaaacggggtgcagcggattatctggtgaaaccctttaatcccgatgagcttgtggtt
cgtctcagaatggttgttgggaatgcacggcttgtggctacagcctcggcaatgcaaacc
gttgcggataagaaaaaccgaaaaagtctgtcaggtgtagaccctgactggattggttcg
agccctgctatgcaggaagtacggtccctggtggaacgggttgcaccgactgattctacc
gttcttgtaactggggaaagtggaaccggtaaagaggtggtagcccggctcattcaccgg
ctcagtaaacgggccgatggcccctttattcctatcaatatggggggtatcccggaaaac
cttatcgaaagtgagctctttggctatgaaaagggagcctttaccggggctgattcccgg
aaaaccggactctgcgaacttgccagcggaggaacgctttttttagatgaggtcggggat
atgcccctgccgctacaggtaaagatcctcaggatgcttcaggaaaagaaaatcatgcgc
cttggggggagccgccagatccctatcgatgtgcggattattgcagccaccaacaaggac
ttggaacaggcggtaaaacagggcgtattcagggaagaccttttctaccggcttgcggtc
attcgactgcgtcttccgccgttgagggatcgccgggaggatatcccgattctggcccag
ttatttgtagaccggtatgctgctgaaatgggccggccgtccctcaaactgggtactgat
gctcttgaactgctttcccgctatagtttcccgggcaatgtccgggaactggaaaatgcg
gtggagcgggcggtgatactctgtgaaggttctgagcttcacagcagagatttttctttc
gccggttccgccatggataaagcaccaccccctggttcatttgcaggggatgctctagct
ggtgaagttaagaccctggaggaacttgagcgggcagccattctcaggaccctggcgctg
taccaggggcaccgggaaaagactgcccaggccctggggataacccgcagaaccctgctc
aataaactcaaggaatatcagattgagggttga
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