Gracilinema caldarium: Spica_1269
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Entry
Spica_1269 CDS
T01573
Name
(GenBank) (Uracil-5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scd03009
]
Spica_1269
Enzymes [BR:
scd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Spica_1269
Ribosome biogenesis [BR:
scd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spica_1269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
PabTrmU54_TRAM_dom
SMC_hinge
Motif
Other DBs
NCBI-ProteinID:
AEJ19415
UniProt:
F8F1T1
LinkDB
All DBs
Position
complement(1436516..1437682)
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AA seq
388 aa
AA seq
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MAIGEKVSGIIVSIAAGGAGILRWQGKTLFIDYTAPGDLVSAVITEETPSWGRATLQKIH
EASPHRTQSPCPYYQHCGGCNLQHLTYTMQLQIKQQLLQDHFTRIGGINRLPHINIVASE
PYGYRNRMQFHRVPKPKTGQSRVGLKERSSDQVLPIETCPIANAGIQRALQAKELVPPPA
LDRFTVYSRFDMFLQEGKQQRGTVPLLGAPIHMDAGVFFQSNAQVLEKLLETVRSVAAQA
DHSLPAGDLYCGVGTFAYFIQDIFSALDLMEENPKALALAKENITHSQARYFAVSDEQWA
KQALTKHQAHRYGFMVLDPPREGLSPSLRNYLSTEGPPLIAYVSCDPATQARDCKSLVQA
GYTLERLEFYDFYPQTSHIESLAVLRRA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcaattggtgaaaaagtatcaggcatcatagtgtctattgctgccggaggggcggga
attctgcgttggcagggaaagactctgttcatcgattataccgcaccgggcgaccttgtt
agtgcagttatcacagaagagaccccttcctggggcagagcaactctgcaaaagattcat
gaagcatcgccccatcgtacccaaagcccctgtccgtattatcagcactgtggtggctgc
aacctccagcacctaacctatactatgcaactgcagattaaacaacaattgctgcaggac
cattttaccagaattggcggcataaaccgccttccacacatcaatattgttgcctctgaa
ccctatggataccggaatcgtatgcagtttcaccgcgtcccaaaaccaaagacaggacaa
agccgggtgggcttaaaagaacggtccagtgatcaggtacttcccatagaaacctgtccc
attgctaatgcaggtattcaacgagccttgcaagctaaagaactggtaccgcctcctgcg
cttgatcgattcaccgtttattctcgtttcgatatgttcttacaagaaggtaaacaacaa
cggggaacggtaccgcttttaggtgccccaattcatatggatgcaggtgtctttttccag
agtaatgcccaagtcctggaaaaactgcttgaaacagtccgatccgtagcagctcaggca
gaccacagccttcctgcaggggatctgtattgtggagtgggaacctttgcctattttatc
caggacatcttttctgcgctggatcttatggaagagaacccaaaagctcttgcattagca
aaggaaaacattacccactcacaggcccgttactttgcagtgagcgatgaacaatgggca
aagcaggcactgacaaaacatcaagctcatcgttatggttttatggttctggaccctcct
cgggaaggtctttccccttctcttcgaaactatctctctacagaaggaccaccattgatt
gcttatgtttcctgtgatccagcaacccaggcaagggactgcaaaagccttgttcaggca
ggttataccctggaacgattggagttctatgatttttatccacagacatcccatatagaa
agccttgcagttctgcggagagcttga
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