Gracilinema caldarium: Spica_1379
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Entry
Spica_1379 CDS
T01573
Name
(GenBank) ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
scd
Gracilinema caldarium
Pathway
scd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Spica_1379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
scd03011
]
Spica_1379
Ribosome [BR:
scd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Spica_1379
Bacteria
Spica_1379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
PCB_OB
Spt6_S1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AEJ19525
UniProt:
F8F3E9
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Position
1562662..1564380
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AA seq
572 aa
AA seq
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MGQMEVEMDESKNSADNIQTQLQEEYLKSLEQLEEGQLVDGYVIQVTPDQVFVDVGYKSE
GKIPIAEFTEVPKVGDTVSVVLITKENKHGEVIVSKQKADIKVFWKNLRQAFQDHVPVEG
VIEKVVKGGYDVNLGAGVKSFLPISQSDANKVDKPEKLLGVKSKFYVERLYSDGKVNIVV
NRRKWMEEEVEARRQAFFANTQIGDEVVGTVKSFTSFGAFIDLGGFDGLLHINDMSWGHV
TRPKDFVKKGQEIRLKVIRIDPAEKRINLSLKHFTDDPWVHFEDKYHVNDIVKGKVTKLT
DFGAFIELEEGIEGLAHISEFSWVKKIQKPEEMLKIGDVVECMILGYDLQAGRVSLGLKQ
VTENPWTSITERYPVGTRLTRKVVKLTNAGAFIQLEEGIDGFLHVDDLSWTKKVKHPGSE
LQVGQDVEVMVIACEPENRSIRLGIKQLTDDPWKSFAATYKVGSPIEGEVSSVTDFGVFV
RVPGGIEGLIHKSNLTENREEDPDEALKKYKVGDTIKAVVLELQPDKQKVAFSIRDYQKK
VQREAISQYMAETETNESTFTLGDMLKSRDSK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagatggaagtggaaatggatgagtctaaaaactccgcggacaacatccagaca
caattacaggaagagtatcttaaatccctcgaacaacttgaagagggccagctagtcgac
gggtatgtcattcaggtaaccccagaccaggtattcgtcgatgtaggctacaagtcggag
ggaaagatcccgatagcggagttcactgaagtcccgaaggttggggataccgtttctgtc
gtgctgattactaaagaaaacaagcatggcgaagtcattgtgtcaaagcaaaaagcggat
attaaagttttctggaaaaaccttcggcaagctttccaggatcatgttcctgtggaaggg
gttatcgagaaagtagtcaagggcggctatgatgttaatctgggcgcaggcgtaaaatcc
tttctccccatcagccagtccgatgctaacaaggttgataaaccagaaaagctccttggg
gtaaaatccaaattttatgttgaacggctctattccgatggcaaggttaacattgtggtt
aaccgccgcaaatggatggaagaagaagtcgaagcccgtcggcaagccttttttgccaat
actcaaattggagacgaagtagtcggtacggtgaagagctttacctccttcggagctttt
atcgatttaggcggttttgatgggctactccatatcaatgatatgagctggggccatgta
actcgtcccaaggattttgtaaagaaggggcaggaaatccgtcttaaggttatccggatc
gatcccgctgaaaagcgtatcaacctgtccttaaagcattttaccgatgatccctgggtg
catttcgaagacaagtatcatgttaatgatattgtaaagggcaaggttaccaagctcacc
gattttggtgcctttatcgagcttgaagaaggtattgagggcctcgcccatatttctgaa
ttctcctgggtaaagaagattcagaagcccgaagagatgctgaaaatcggtgacgtcgta
gaatgcatgatcctcggttatgatctccaggcaggtcgggtatccctgggcctgaaacag
gtaacagagaatccctggaccagcatcaccgaacgctatcccgttggaaccaggcttacc
cgtaaagtggtaaaactgaccaatgcgggcgccttcatccagctggaagagggtattgat
ggcttcctccatgtggatgatctttcctggaccaagaaggtaaaacatccgggaagcgaa
ctgcaggtaggacaggacgttgaggttatggtgatcgcctgtgaaccggaaaaccgcagc
attcgtcttggtattaaacagctcaccgatgatccctggaaatcctttgcagcaacctac
aaagttggttctcccattgaaggagaagtatcttcagtaaccgattttggagtttttgta
cgtgttcccggtgggatcgaaggtcttattcataaatcgaaccttaccgaaaatcgggaa
gaagatcctgatgaagccttaaaaaaatataaggtcggtgatacaataaaggctgtagtg
cttgaacttcagccagacaaacagaaggtagccttttctattcgagattatcagaaaaag
gttcaaagggaagcaatttcccagtatatggctgaaacagaaacaaatgaatctaccttt
acccttggagatatgttaaaatccagggattctaagtaa
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