Gracilinema caldarium: Spica_1509
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Entry
Spica_1509 CDS
T01573
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
scd
Gracilinema caldarium
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Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA_2
FleQ
AAA
AAA_16
HTH_30
PDE8A_N
AAA_22
MCM
AAA_19
AAA_30
VpsR
nSTAND3
IstB_IS21
OKR_DC_1_N
bpMoxR
GlnR_1st
AAA_29
DUF5843
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AEJ19653
UniProt:
F8EZ61
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Position
complement(1705920..1707287)
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AA seq
455 aa
AA seq
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MKFKLLVVDDEKNIREGLAAALQLEGHDVVVAADGDEAYKRFQKGDIDLVITDLRMPGLS
GEELLRKINTESPGVPVIVLTGHGTVENAVDAMRNGAYDFLTKPLNLDRLSLLVKRALQN
RELVLQHRRLEEELEHNRTFEMFIGNSPAMRKIFDTIRQVAPTKASVLITGESGVGKELV
ANAIHELSPRKNKPLIKVHCAALAATLLESELFGHEKGAFTGAVGRKRGRFELAHEGTLF
LDEIGEIDQNVQIKILRVLQEKKFERVGGEETLEVDVRIVAATNRDLKAEIEKGTFREDL
YYRLNVVNIHVPALRERKEDIPLLATAFLKEFAKENNKQIDGIDPRARTALYGYDWPGNV
RELRNCMESAVVLAKGSVITLDDLPPTVRKSSESTSIHIPLGIPLEEAEKIIIRETLSAY
KGNKSKTAEVLGIGRKTLHRKLAEWGDISGDEAED
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaaactccttgttgtagatgatgaaaaaaatatccgcgaaggccttgccgca
gccctccagctcgaaggccacgatgtggtggtagccgccgatggggacgaggcctataaa
cggttccaaaagggcgatatcgatctcgttatcaccgacctccgtatgcccggtttgagt
ggtgaagaactgcttcggaaaataaacaccgaaagtcccggtgtaccggtgatcgtgttg
accggccatggcaccgtggaaaatgcggtggacgccatgcggaatggggcctatgatttt
ctcaccaagcccctcaatctggaccggctctccctcctcgtaaaacgggctctgcagaat
cgggaattagtattacagcaccgccggctcgaagaagaactggaacataatcgtactttc
gaaatgttcatcggcaacagccctgccatgcgaaagattttcgacacgatcaggcaggtt
gcccccaccaaggcttcggtgttaatcaccggtgaatccggtgttggcaaggaactggtg
gccaatgcaatccatgaactgtcaccccggaaaaacaagcccctcatcaaggtccattgt
gcagccctggcagcgacactcctggaaagcgaacttttcggtcatgaaaagggagccttt
accggggcggtaggccggaaacggggccgctttgaattagcccatgagggaaccctcttc
ctcgatgaaatcggcgaaattgatcagaatgtgcagataaaaatattacgggtcctccag
gaaaagaaattcgaacgggtcggcggagaagaaacgttggaggtcgatgtacggattgtg
gctgccacaaaccgggacctgaaagccgaaatagaaaagggtaccttccgggaagatctc
tattaccggctcaacgtggtaaacatccatgttccagccctgcgggaacgaaaagaagat
atccccctgctggccacagcttttcttaaggaatttgccaaagaaaacaataaacagata
gatggaatcgatccccgagccagaacagccctttacggttatgattggcctggcaatgtg
cgggaactgcggaactgtatggaaagcgcggtggtccttgcgaagggttcagttataacc
ctggacgacctgccgcctacagtgcggaaatcctctgaatcaacttcgattcatattcct
cttggtatccctttggaagaagcagaaaaaattatcatcagggaaaccttaagcgcctac
aagggaaataaaagcaagaccgccgaagtcctgggaattggacggaaaactctgcaccgg
aaacttgccgaatggggtgatatcagcggggatgaagcagaggattaa
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