Gracilinema caldarium: Spica_1557
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Entry
Spica_1557 CDS
T01573
Name
(GenBank) iron (metal) dependent repressor, DtxR family
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scd03000
]
Spica_1557
Transcription factors [BR:
scd03000
]
Prokaryotic type
Helix-turn-helix
Other families
Spica_1557
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
MarR_2
HTH_IclR
MarR
HTH_24
HTH_Crp_2
HVO_A0261_N
TrmB
GntR
HTH_5
HTH_PafC
wHTH-PRTase_assc
Rrf2
WHD_RNase_R
HTH_AsnC-type
HTH_20
HTH_11
HTH_1
HTH_36
HVO_A0114
HTH_DeoR
NirdL-like_HTH
HTH_10
HTH_23
HTH_27
DUF7343
HTH_47
Penicillinase_R
HTH_29
AbiEi_4
HTH_CodY
HxlR
HTH_28
DUF4423
DUF2250
SMC_ScpB
TFIIE_alpha
DUF6429
HTH_Cmi2_C
Dimerisation
HTH_22
TetR_N
FaeA
LexA_DNA_bind
Ndufs5
Ribosomal_S19e
RPA_C
Motif
Other DBs
NCBI-ProteinID:
AEJ19701
UniProt:
F8EZA9
LinkDB
All DBs
Position
1753856..1754218
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AA seq
120 aa
AA seq
DB search
MTQSLEDYLEAVSFLADDGAVRVTDIAQRLGVSKPSVLTALRALEDRGLLEHERYRGVVL
TQKGEQEAQAIRERHTFLTNFLRDVVGVSQETAEKDACRMEHVLSEETLERMRAIVSCSG
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatccctcgaagattatttagaagcagtatcgttccttgccgatgacggtgcg
gttcgggttactgacatcgcccagagattgggtgtatccaaaccctcagtgctcaccgcc
cttcgggccctagaagaccggggactattagaacatgaacgataccggggagtagttctg
acccaaaagggcgaacaagaggctcaagccatccgggaacggcatacttttttaaccaat
tttcttcgtgatgtggtgggggtttcccaggaaaccgccgaaaaggatgcctgccggatg
gaacatgtactttccgaagaaactctggaacggatgcgggccattgtgtcctgcagcggt
tag
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