Gracilinema caldarium: Spica_2003
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Entry
Spica_2003 CDS
T01573
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K02005
HlyD family secretion protein
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Spica_2003
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Ortholog
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GFIT
Motif
Pfam:
YknX_C
BSH_CusB
BSH_YknX
Biotin_lipoyl
BSH_RND
RND-MFP_C
BSH_CzcB
CzcB_C
BSH_YhbJ
BSH_Fcp1
NQRA_N
BSH_RND_rel
HH_EMRA
BSH_ALG44
Motif
Other DBs
NCBI-ProteinID:
AEJ20131
UniProt:
F8EXW7
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Position
complement(2244576..2245883)
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AA seq
435 aa
AA seq
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MPNISPIFQDESHQSPGTGRKSTILWFIILGTVIVIGITGLALPSFNAVKPQTTTVVGKN
LSITAVEKKTIRDIVSVSGVLELSKKEIITSPGDGVIDQLYVQEGDQVAAGQVLLQIKTS
DLKSQLQSKQLSLEKLNYQIEQSQVIQEFTRKQYAIEIAAAKRSIEDAQRELDKVKALKD
KSLASEQDLLSAQLTLQSAQDTLAKAQINQDQAEANYQLNLKNSLADRTILEKDIRDLKD
EITAYTVRTSRGGTVYSLSVESGGTVSAYEELAVVANAGDSRAALDVPETRIGSITKGLP
VTIYIGETNYPAQVETIAPTATSSSSSSGSVVLVTAAFKSKPEKPTIGASVSGEIVAGTI
TDALVLPRGPYLSSGNYSNVYVVSNGVAKKATVKFGVADGAYIQVTSGLNEGDRVIISDY
RDFIHLDSFPVEETK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatataagtcctatctttcaggatgaatcgcatcagtcaccaggaactggtcga
aaatccacgattctctggtttatcatcctggggactgtcatagttattggtattacaggt
ttggcactcccgagttttaatgctgtaaagccgcagactactactgttgtaggaaaaaat
ctctctataacagcagtagaaaagaaaactatacgggatattgtttctgtttcgggtgtt
ctagagctttctaaaaaagagattatcacctcccctggagacggggttatcgatcagctc
tatgtacaggaaggtgatcaggtagccgctgggcaggtattgcttcagattaaaacatct
gatctgaaatctcaattacagagtaagcaattatctctggaaaaattaaactaccaaatt
gaacaatctcaggttattcaggaatttacccgtaaacagtatgctatagaaatcgccgct
gcgaaacgatctatagaagatgctcaacgtgaacttgataaagttaaagcattaaaggat
aaaagccttgcttctgaacaggatctattatcagcacagttaacattacagagtgctcaa
gatactctagctaaggctcagattaatcaagatcaggctgaagcaaactatcagttgaat
ttaaaaaattctttggcagatcgtaccattttagaaaaggatattagggacttaaaagat
gagatcaccgcctatacggttcgcacgagccggggcggcacggtttacagtctttcggta
gaatctggcggtactgtaagcgcctatgaagaactagcagtggtggctaatgctggtgat
agccgtgccgccctggatgtgccggagacaagaataggatccataacgaaggggctaccg
gtgactatatacattggagaaactaattatcccgcacaggtagaaaccattgcacctact
gctacgagttcttccagttcttctggctcagttgttctagttactgcagcctttaagtct
aaacctgaaaagcctactattggagcttctgtgtctggagaaattgttgcaggaacgatt
acagatgccctggtgttaccccggggcccctacctatccagtgggaactatagcaatgtt
tatgtggtctctaatggagtagctaaaaaagcaaccgtaaagtttggtgtggccgatgga
gcatatattcaggtaacttcaggtcttaatgaaggtgatcgggtcattatttcggactat
cgtgattttatccatctggattctttcccggtagaagaaactaaataa
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