Gracilinema caldarium: Spica_2010
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Entry
Spica_2010 CDS
T01573
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10543
D-xylose transport system substrate-binding protein
Organism
scd
Gracilinema caldarium
Pathway
scd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spica_2010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_2010
Transporters [BR:
scd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
Spica_2010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AEJ20138
UniProt:
F8EXX4
LinkDB
All DBs
Position
complement(2255023..2256054)
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AA seq
343 aa
AA seq
DB search
MKRILFASVVVFVAIIMSVSCTRTNTNGEGYKPIIGLSLDSLVVERWRRDVDSFTRAATD
LDATVKLRVANQDADTQIAQIKNLVDSGIDVLVVIPNHADKLTEVCRMVERKGIPVISYD
RLVNRANVDLYISFDNVQVGYLMAHTALMARPKGNYIIINGAITDNNAYMINRGYHEVLG
PQIATGTIQLVKEIWPSDWISDEVKSRFEMLLSEEKNIDVVLCGNDMLAETVIGVLSENR
MLGKTLVLGQDAELSACQRVAEESQYATIYKPIEKLSLKAAALAVMLAKGEKLPATETIN
DGLYEVPYVKLEPILVTKESLEATVIKDGFHQREDVFRNVSNH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatactctttgccagtgtggtcgtatttgttgctatcatcatgtctgtttca
tgtaccagaactaataccaacggtgaaggttataaacctatcattggattatcccttgat
tctcttgtagtagaacgctggcgccgggatgtggatagctttaccagggctgctacagat
ctggatgcgacagtaaaactacgggttgctaatcaggatgcggatacccagatagcccaa
atcaagaaccttgtagattcaggcattgatgtgctggttgttattccgaatcatgcggat
aagttgacagaagtctgtcgtatggtggagcgaaaaggtataccagttattagttacgac
cgtctggtgaatcgtgcgaatgtggatctctatatttcctttgataatgtgcaggttggg
tacctcatggctcataccgctcttatggcaagaccaaagggaaactatattattataaac
ggtgcaatcactgacaataatgcttatatgattaatcgaggttaccatgaagttctgggt
ccccagatcgccacaggaactatccaactggtaaaggaaatatggccttcggactggatc
agtgatgaggtaaaatcccggtttgaaatgctcctttcggaagagaaaaatatcgatgta
gttctttgtggcaatgatatgctggcagaaacggtgattggagtgctttctgaaaacaga
atgctgggcaaaaccctggtattggggcaggatgcggaactttcagcatgtcagcgggtt
gctgaagagagtcagtatgcaaccatttataaaccaattgaaaaattatcgttaaaagct
gctgccctggcggtaatgctagcaaagggtgaaaaacttcccgccaccgaaactattaat
gatggattgtatgaagttccctatgtaaaactggaaccaatactggttaccaaagagagc
ttggaggctacagttataaaggatggtttccatcagcgtgaagatgttttcagaaatgtc
tcaaatcattaa
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