Gracilinema caldarium: Spica_2015
Help
Entry
Spica_2015 CDS
T01573
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit clpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
scd03110
]
Spica_2015
Chaperones and folding catalysts [BR:
scd03110
]
Heat shock proteins
HSP100
Spica_2015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
Clp_N
AAA_16
AAA_14
Sigma54_activat
IstB_IS21
AAA_7
TniB
bpMoxR
TsaE
RuvB_N
Torsin
RNA_helicase
AAA_3
RsgA_GTPase
Mg_chelatase
ResIII
AAA_28
AAA_6
AAA_33
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEJ20143
UniProt:
F8EXX9
LinkDB
All DBs
Position
complement(2260884..2263325)
Genome browser
AA seq
813 aa
AA seq
DB search
MQISRHVQAIINAAYNEAKVRNHEYLTPEHVLYAALAFEEVQQVLLACGADLNQIKSGME
NYFEQKVPVVQNMEPTQTVGFQSVLERAVLQSQSAQKKELDVADILVSLYDEERNYCAYY
LRKAGVKRIDLLEVLSHGIRFGDESEEEGDNGDPAASGSWKEKNEENGEDAEADSGIEAE
PRMRPARKSALERFTTDLTALAREGKLEPVIGREHELDRTVQVLCRRLKNNPIHVGDSGV
GKTAITEGLAQRIVAGNVPPTLRGFSIYALDMGALVAGTKYRGDFEERIKKVVDEILKKE
KAILFIDEIHTLVGAGATSGGSLDASNLLKPALTSGKIRCIGSTTHEEYTKYFDKDRALS
RRFQKIDINEPSEADAIAILKGLRHKYEEFHRVRYTDAALETAVRLSAQFITERRLPDKA
IDVIDEAGAFARIQAFKARENQDAETAGEVRVDTNVPTTAESQAEAQTDTEAAFAPENLD
ALPIIEIDVPQIETVVARIARIPERTVGENEKDKLRFLESRLKERIFGQDAAVEAVVRAV
KRSRAGFRAPNKPIANFLFVGPTGVGKTELARSLADVLGIAMHRFDMSEYQEKHTVSRLI
GSPPGYVGYEEGGLLTDAVRKQPHAVVLLDEIEKAHPDIFNILLQIMDYATLTDNNGRKA
DFRNVVLIMTSNAGARDIGKSLIGFGERILDEAVVDGAVERIFTPEFRNRLDAVVRFGHL
NQDIVASIVRKELDAFRMQLAEKQVVLEVTETCIMQLAKDGYSREFGARNVSRLIEDKIK
SFFVDEVLFGRLASGGVARADWSNGAYRIEVVS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcagccgccatgtgcaggctataatcaatgccgcttataatgaagccaaggtt
cggaatcacgaatatttaacccccgaacatgtgctttatgccgccctggcctttgaggag
gttcagcaggttctgctcgcctgcggtgcggatctgaaccagataaaaagcggtatggaa
aactattttgagcagaaagttccggtggtccagaacatggaacctacccagacggtgggg
tttcagagcgtacttgaacgggcggtactccaaagccaatcggcccaaaaaaaagaactc
gatgtggctgatattctcgtgtccctctatgatgaggagcgtaattactgtgcctattat
ctgcgtaaagccggtgtaaaacggattgaccttcttgaggtgctttcccatgggatccgt
tttggggatgaatcggaagaggagggggataatggggacccagccgcttcaggctcatgg
aaagaaaaaaatgaagagaacggagaagatgcagaggctgatagcggtatcgaggctgaa
ccgcgcatgcggccggcccgtaagagtgccctagagcggtttactactgacctgactgcc
ctggctcgggagggcaagctcgagcctgtgattggccgggaacacgaactggatcgaacg
gtccaggtcctgtgccgccgcctgaaaaataatcccatccatgtgggggattccggtgtg
gggaaaaccgccattaccgaggggcttgcccagcgaattgtggcaggcaatgtgccgccg
accttgaggggattttcaatctacgctttggacatgggtgcccttgtggcaggaaccaag
taccggggtgattttgaggaacgaattaagaaggtggtggatgaaatcctgaaaaaagaa
aaggccatcctttttattgatgaaattcacaccctggtgggtgccggtgcgacttcaggg
ggctccctggatgcctcgaatttactgaaacctgcgctgacctcaggcaagattcgctgt
attggctccacaacccacgaagaatacaccaagtatttcgataaggaccgggcgctttcg
cgccggttccagaaaattgatataaacgagcccagtgaggccgatgcgattgcgattctt
aaggggctccggcacaaatatgaagaattccaccgcgttcgctataccgatgcggccctc
gaaacggcggtgcgcctctctgcccagtttatcaccgagcggcgtcttcccgataaggcc
atcgatgtgatcgatgaggccggtgcctttgcccggatccaggcctttaaggctcgggaa
aatcaggatgcagagacagcgggggaagtccgggtagacaccaatgtccccaccaccgca
gaatctcaggcagaggcccagacagatacagaggcagcctttgcccctgaaaacctggat
gctctgcctattatagagattgatgttcctcagatcgaaactgtggtagcccggattgcc
cggattcccgaacgcacggttggagaaaatgaaaaggataagctccggttcctcgaaagc
cgcctcaaggagcgaatcttcggccaggatgcggcggtcgaagccgtcgttcgggcggta
aaacgatcccgggctggattccgtgctcccaataagcccattgccaatttcctctttgtt
ggtcctacgggggtaggtaaaactgagctcgcccggagtctggcggatgtgttgggcatt
gccatgcatcgctttgatatgagtgaatatcaggaaaagcataccgtgagcaggcttatt
gggtctcctcccgggtatgtgggatatgaagagggcgggctcttaaccgatgcggttcgc
aagcagccccatgcggtggttctgctggacgaaatagaaaaggcccatccggatatcttc
aacatacttttacagattatggactatgctacattgaccgacaacaacggcagaaaagcc
gacttccgcaatgtggtgcttatcatgaccagcaatgccggtgcccgggatatcggcaaa
agcctcattggttttggggaacggatcctcgatgaggcggtggtggatggggcggtagag
cggatctttacccccgaattccgaaaccgcctggatgcggtggtccgctttggccacctg
aaccaggacattgtggcatccatagtccgcaaggaattggacgccttcaggatgcagttg
gctgaaaagcaggttgtgctggaagtgaccgagacctgtatcatgcagcttgctaaggat
ggatacagtcgtgaattcggcgcacgcaatgtgagcagactaatagaagataaaattaag
agcttctttgtagatgaggtcctctttggccggcttgcctctggcggagtggcccgcgca
gactggtccaacggtgcataccgtatcgaggtggtttcctaa
DBGET
integrated database retrieval system
