KEGG   Gracilinema caldarium: Spica_2026
Entry
Spica_2026        CDS       T01573                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K02945  small subunit ribosomal protein S1
Organism
scd  Gracilinema caldarium
Pathway
scd03010  Ribosome
Brite
KEGG Orthology (KO) [BR:scd00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Spica_2026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:scd03011]
    Spica_2026
Ribosome [BR:scd03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Spica_2026
  Bacteria
    Spica_2026
SSDB
Motif
Pfam: S1 S1_RRP5 S1_2 Spt6_S1
Other DBs
NCBI-ProteinID: AEJ20153
UniProt: F8EZD0
LinkDB
Position
2273394..2274557
AA seq 387 aa
MAKREGNQGSTSFADYMNSMDSRKIQFQPGQMIESRIVSISNDTVFLELNGKSEGILEKA
ELLDKNGELTLKEGDTIKAFFLKAQNGELHFTTRISGEKADLSILEEAYKNHIPVEGVVE
KEIKGGYEVAIGETRAFCPYSQMGIKRSEEGSNWVGKHLTFLIQEYKDNGRNLIVSNRAI
EEALQAEKIAKLKEILKEHSIITGTIASVQDFGAFVDLGGIQGLIPVSEISRERVANINE
VLQSGQEIRAEIIKIDWQTERITLSMKSLSADPWTEAAKKYPIGSKHTGKVIRITDYGAF
VSLEPGLDGLIHVSELRSGDKYNNVKGAVKLGQTLMVKILEVDEIRRRISLKPASSAEEE
AVSKQYMADEDPQDTYNPFAALLKKNK
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggcgaaacgtgaaggaaatcaaggatccactagttttgcggattatatgaattctatg
gacagccggaagatccaattccagccaggacagatgatagaaagcagaattgtttctatt
tcaaatgatacggtgtttttagagcttaatggaaaaagcgaaggtattttagaaaaggcc
gagttgcttgataaaaacggcgaactaaccctgaaagaaggggatacaataaaggccttc
tttttgaaggctcagaacggagaacttcatttcacgacccgaattagcggcgaaaaggct
gatttatctatactcgaagaagcttacaagaaccatattcctgttgaaggtgtggtagaa
aaagaaattaagggaggttacgaggtagcaattggtgagaccagagccttttgcccctat
tcccagatgggaataaaacggtcagaagaaggttccaactgggtcgggaagcatctcacc
tttctcatacaagaatataaagataatggccggaatcttatcgtatctaaccgggctata
gaagaggccctgcaggcagaaaaaattgctaaacttaaggaaatccttaaggaacacagt
attattaccggcaccatcgcatcggtgcaggattttggtgcctttgtagacttaggtggg
atacaaggactcattccagtctcagaaataagccgggaacgggtagcaaacataaacgag
gttttgcagtctggacaggaaatacgggcagaaattatcaaaattgattggcaaaccgaa
cggatcaccctcagcatgaaaagcctctcggccgatccctggacagaggcagcaaagaag
taccccattggatcaaaacataccggcaaggtaatccgcattaccgattatggagctttt
gtatccctggagccaggtctagacgggttgatacacgtttctgaactgcgaagcggcgac
aagtacaacaatgtaaagggtgcagtcaagctaggtcagaccttaatggttaagatactg
gaagttgatgaaatccgaaggcgtattagccttaagccagcaagttctgctgaagaagag
gcggtttccaaacaatatatggccgatgaagacccccaggatacctacaatccctttgct
gcgttattaaagaaaaacaaataa

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