Gracilinema caldarium: Spica_2026
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Entry
Spica_2026 CDS
T01573
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
scd
Gracilinema caldarium
Pathway
scd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Spica_2026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
scd03011
]
Spica_2026
Ribosome [BR:
scd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Spica_2026
Bacteria
Spica_2026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
S1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AEJ20153
UniProt:
F8EZD0
LinkDB
All DBs
Position
2273394..2274557
Genome browser
AA seq
387 aa
AA seq
DB search
MAKREGNQGSTSFADYMNSMDSRKIQFQPGQMIESRIVSISNDTVFLELNGKSEGILEKA
ELLDKNGELTLKEGDTIKAFFLKAQNGELHFTTRISGEKADLSILEEAYKNHIPVEGVVE
KEIKGGYEVAIGETRAFCPYSQMGIKRSEEGSNWVGKHLTFLIQEYKDNGRNLIVSNRAI
EEALQAEKIAKLKEILKEHSIITGTIASVQDFGAFVDLGGIQGLIPVSEISRERVANINE
VLQSGQEIRAEIIKIDWQTERITLSMKSLSADPWTEAAKKYPIGSKHTGKVIRITDYGAF
VSLEPGLDGLIHVSELRSGDKYNNVKGAVKLGQTLMVKILEVDEIRRRISLKPASSAEEE
AVSKQYMADEDPQDTYNPFAALLKKNK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgtgaaggaaatcaaggatccactagttttgcggattatatgaattctatg
gacagccggaagatccaattccagccaggacagatgatagaaagcagaattgtttctatt
tcaaatgatacggtgtttttagagcttaatggaaaaagcgaaggtattttagaaaaggcc
gagttgcttgataaaaacggcgaactaaccctgaaagaaggggatacaataaaggccttc
tttttgaaggctcagaacggagaacttcatttcacgacccgaattagcggcgaaaaggct
gatttatctatactcgaagaagcttacaagaaccatattcctgttgaaggtgtggtagaa
aaagaaattaagggaggttacgaggtagcaattggtgagaccagagccttttgcccctat
tcccagatgggaataaaacggtcagaagaaggttccaactgggtcgggaagcatctcacc
tttctcatacaagaatataaagataatggccggaatcttatcgtatctaaccgggctata
gaagaggccctgcaggcagaaaaaattgctaaacttaaggaaatccttaaggaacacagt
attattaccggcaccatcgcatcggtgcaggattttggtgcctttgtagacttaggtggg
atacaaggactcattccagtctcagaaataagccgggaacgggtagcaaacataaacgag
gttttgcagtctggacaggaaatacgggcagaaattatcaaaattgattggcaaaccgaa
cggatcaccctcagcatgaaaagcctctcggccgatccctggacagaggcagcaaagaag
taccccattggatcaaaacataccggcaaggtaatccgcattaccgattatggagctttt
gtatccctggagccaggtctagacgggttgatacacgtttctgaactgcgaagcggcgac
aagtacaacaatgtaaagggtgcagtcaagctaggtcagaccttaatggttaagatactg
gaagttgatgaaatccgaaggcgtattagccttaagccagcaagttctgctgaagaagag
gcggtttccaaacaatatatggccgatgaagacccccaggatacctacaatccctttgct
gcgttattaaagaaaaacaaataa
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