Gracilinema caldarium: Spica_2148
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Entry
Spica_2148 CDS
T01573
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
scd
Gracilinema caldarium
Pathway
scd02010
ABC transporters
scd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spica_2148
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spica_2148
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_2148
Transporters [BR:
scd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spica_2148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AEJ20271
UniProt:
F8F0Y5
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All DBs
Position
2421513..2422499
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AA seq
328 aa
AA seq
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MKHITTYLAPTILLLILLLGSMIILFFTGNPSPQNQLIIPVVLKTIDTNMEFWQVVKNGM
QVAAAENGVSLEITGPWLESDIEGQIEITKNIISGHPRVLILSATDLNKLVPLVQQAKDL
DIPVVTLDSGVNSDIPVTFVATNNIEAAQKLTQYAISQISPGKPVAIINHVPGATTAIER
EQGVRKILEAEGKNPILGTWFTNNFQEKAYSITMDLINTHPDITAILAMNEVSVIGAAQA
IEETGMTGKVKLFGFDNSLQEVKYLERGVVQATVIQKPFNMGYLAVKAAIDAVHKKKLPK
FIDTGSVLIIPDNMYLPENQKLLFPFIE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatataaccacctatttagctccaacaatattactactcattttattacttggt
agcatgatcattctattctttactgggaatccttctccacaaaaccaattaattattcca
gttgttttaaaaaccatagacaccaatatggaattttggcaggttgttaaaaatggaatg
caggtcgcagctgcagaaaatggagttagcctagaaattactgggccatggctcgaaagt
gatattgaagggcaaatcgagataacaaagaacattataagcgggcatcctcgagtactg
attctttctgcaacagatttaaataaacttgtacctcttgtacaacaagctaaagatctt
gacatacctgttgttaccctagactcaggagtaaatagcgatataccagtgacctttgta
gcaaccaataatatagaagctgctcaaaaattgacacaatatgctattagtcagatctca
ccaggaaaacctgttgcaattattaatcatgtgcctggtgcaacaacagcaattgaacga
gaacagggtgttcgtaaaattttagaagcagagggtaaaaatcctattcttggtacatgg
tttaccaataattttcaggaaaaggcttattcaattacgatggatttaattaatacccat
cctgatatcacagcaatattggctatgaatgaagtatctgtaatcggagcagctcaggcg
attgaagaaacaggaatgacagggaaagttaagctatttggatttgataattctttacaa
gaagttaaatatttagaacgtggtgttgtgcaggctacggtcattcaaaaaccctttaat
atgggttatcttgcagtaaaagcagcaatcgatgcagtacataaaaagaagctgcctaaa
tttatagataccggctcagttcttataatacctgataatatgtatttaccagaaaaccaa
aagttattattcccttttattgagtag
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