Gracilinema caldarium: Spica_2163
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Entry
Spica_2163 CDS
T01573
Name
(GenBank) transcriptional regulator, LysR family
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
scd
Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scd03000
]
Spica_2163
Transcription factors [BR:
scd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Spica_2163
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MotY_N
HTH_5
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AEJ20286
UniProt:
F8F100
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Position
complement(2433660..2434523)
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AA seq
287 aa
AA seq
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MIDFRLRTFMTVWEEKSFTRASQKLCITQSAVSQHIKMLESQVGKKLFNYESRTLTLTDA
GQLLYRYAVTAWSDGLKTLENISRLEDHPLVRIGATRSIGAYLLPELLVSYMHRHPATEL
TVSVENTRDLLEKLERGLLDFIFLEGIFDQDAYNVQVVMKDAFIPLCSPDHRLARGQYSL
IDLLSERLIVREVGSGSRAVLELALQNLNCTIQSFFRKIELGNIEAIKVLTSRNMGITFL
YKQSVMKELQEGSLVQINVRDFTMYHDFCFVTLKNSLYQDVYKELVQ
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattttagactcaggacatttatgacggtctgggaagaaaaaagttttactcgg
gcaagccagaagctatgtattacccaatctgcggttagccagcatattaaaatgttagaa
tcccaggtaggtaaaaaactatttaattatgaatctcgaacgttaactctgactgatgca
ggccaattactttacagatatgcagttactgcctggtctgatggtctgaaaaccctagaa
aacatcagccgattggaggaccatcctcttgtacggatcggtgctaccaggtctattggt
gcttatcttttaccggaacttctagtttcctacatgcatcgacatcctgcgacagaactt
acagtatccgtagaaaatacccgggatctgttagaaaagctggaaagaggtttgttagac
ttcatttttttggagggtatctttgatcaggatgcttataacgttcaggtcgttatgaaa
gacgcctttatccctctctgttcccctgatcataggcttgcaagggggcaatattccctt
attgaccttctttcagagcgcctcattgtcagagaagtcggaagcggttcccgggctgtt
ttagaattagctttacaaaatcttaattgtacgatacagagttttttccgaaaaattgaa
ttaggcaatatagaagctataaaagttcttacttcccgtaatatgggtatcactttttta
tataaacaatcagtaatgaaagaattacaggaaggttctctagttcagattaatgtccgt
gactttactatgtaccatgatttttgttttgtaacccttaaaaacagtctctatcaggat
gtatataaagagctagtgcaataa
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