Gracilinema caldarium: Spica_2211
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Entry
Spica_2211 CDS
T01573
Name
(GenBank) SMC domain protein
Organism
scd
Gracilinema caldarium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
AAA_15
ABC_tran
AAA_21
MukB
AAA_23
AAA_7
RsgA_GTPase
RNA_pol_inhib
AAA_22
TPR_1
TPR_11
Motif
Other DBs
NCBI-ProteinID:
AEJ20329
UniProt:
F8F257
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Position
2479804..2483019
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AA seq
1071 aa
AA seq
DB search
MITLKKVRLIQWHSFRDVTIPIGERTLFVGENGSGKSTIIDAIQYALVAQLHKIRFNAAA
NEKRSGRSLDGYVLAKTGYEGEEYQRTEGISHVMLEFEKGEASFSAGICAEITKDTTQVR
ELPWIAQGVQVKDIPLFLDSTHLLGSQQFKQRMRDLGALVFDSKKEYQKELTHLLGVFRR
NVEFNPSLDALVRSIGFVPMDSVNRFVCDYILEERMVDISVMKSNLQSYKDAEAEAELAI
KNIAALEDILAIARVWQQHNRTILNQEYLQKRLQMELEQERLEENHKESQRLEAEEQRKA
EEIRRLQEELEALRDQVNQLSLSIQTHQVYQLIQDLERRKNQLLKELEQARSNRERYQTL
LSQLEALLNRELERDREGNVDMDRSAESLETEKETLYRSLSKSQEERENLRKDLGDLARE
LEELERGLVRYPEGPAELVSALREEGIQAWIFADLVEVADPAWQNALEGWLNTQRFAVLV
EQEQFQRAIAIYDRLPRQIGGVPLPNLERMAQSEVRPHSLAELVVTDSPFARRYADYILG
RVIRTDQEHLKDFDQSVTQTCLTYSAHTVNRIREAVYSRWYLGKGARERRKAELLARRKE
LQEALSRLELSIKLMEQQTELLKRALPALTEMRYLSSSIATIPELERSITEISEQIRRVD
TSDLEVLRNELDERKRTLGSREAALSQAQIALGSIQGRAKTLAEARPPLEASAETRRAQF
QAFVANREQFLEEWEAYYKERVHSREDRQSILANYEGSLQGTRNKLQKALENYQRAIQKY
NLDWNALLSLLPEEASEIEALKKRLEASELPLYKEKISRARAMAEKQFKEHFVTRLNEYI
EEARESFREINAILRSLTFGKDQYHFTLEERNDRKAQLEVIRKAAEIHENQGSLFDALIS
EGEREAVEELFNRILKNELDSFEVRQLCDYRTYFTYDIRVRDTSAMDPKTGKVPELSLSR
ALKEKSGGESQTPYYVAIAASIYRYYKDDPENTVRLVVFDEAFNKMDERRIGVTLELFQE
LGMQIITAVPSEKLEIIQPYMDTVNLVLRYGNEGWVRDYRAVTVAATTGSE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgattaccctgaaaaaggtgcggcttatccagtggcacagtttccgggatgttaccatc
cctatcggagaacggaccctctttgtgggtgaaaatggctccggcaaatcgaccattatc
gatgcaatccagtatgccctggtggcccagcttcacaagatccgctttaatgcagcggcc
aatgaaaaacgatcgggccgcagtctcgatgggtatgtactggctaaaaccggttatgaa
ggggaggaatatcagcgcacagaagggataagccatgtaatgctggaattcgagaagggt
gaagcatcattttctgcggggatctgcgcggaaattaccaaagatacaacccaggtcagg
gaactcccctggattgcccagggggttcaggtaaaggatattcccctctttctcgatagc
acccaccttttgggatcccagcagtttaaacagcggatgcgagacctgggcgccctggtc
tttgattccaaaaaagaataccagaaggaacttacccaccttttgggggtattccggcgt
aatgtggaattcaatccctctctggatgccctggtccgctcgattggctttgtacccatg
gattcggtaaaccgttttgtctgcgattatatcctggaagagcggatggtagacatctct
gtgatgaagagcaacctccagagctataaggatgcggaggccgaagctgagcttgccata
aaaaatattgcagctttggaggatatcctcgccatagccagggtttggcagcagcataat
agaaccatcctgaaccaggaatatctgcaaaagcgactccagatggaactggaacaggaa
cggctagaggaaaaccacaaagaaagccagcggctcgaagcggaagaacagcgaaaagcc
gaagaaatccgacgcctccaggaagagctcgaagccctgcgggaccaggtgaaccagctg
agcctatccatacagacccaccaggtgtatcagcttatccaggatctggagcgccgcaag
aatcagctcttaaaggagctggaacaggcccgctcaaaccgggaacggtaccaaaccctg
ctaagccagcttgaagccctattaaatcgggagctcgaacgggacagggaaggcaatgtg
gatatggaccgctctgcagaaagcctggaaacggaaaaagaaaccctctaccggagtctg
agcaagagccaggaagaacgggaaaacctgcgcaaagacctgggcgacctggcacgagaa
ctggaggaactggaacggggcctggtccgctatcctgaggggcctgcagaactggtatcg
gccttaagagaagagggtattcaggcatggatatttgcagacctggtagaagtagccgat
ccggcctggcagaacgccctggagggctggcttaatacccagcgttttgcggtgctggtg
gaacaggaacagtttcagcgggccatcgccatctatgatcggcttccccggcagatcgga
ggggttcctctgccaaacctggagcggatggcccaaagcgaggtacgcccccactcactg
gcagagcttgtagtgaccgattcaccctttgcccggcgctatgcggactacatcctgggc
cgggttatccgaaccgaccaggaacacttaaaggactttgaccagagtgttacccaaacc
tgtctcacctactctgcccatacggtaaaccggatccgggaggcggtgtacagccgctgg
tatctgggcaaaggggcccgggagcgccgtaaggcagaactccttgcccggcgaaaggaa
ctgcaggaagcgctcagccggctcgaactatccatcaaactgatggaacaacaaacggaa
cttttaaagcgggccctgccggccctcaccgaaatgcggtacctttcatcgtccatcgct
accattcccgaactggagcgcagtattaccgaaatctctgaacagattcgccgggtagac
acctctgacctggaagtacttcggaatgagcttgatgaacggaagcggacattagggagc
cgggaggcggctctttcccaagcccagattgccctgggaagcattcagggaagggcaaag
accctggcagaagcaaggcctccgctggaggcgtccgccgaaacccgaagagcccagttt
caagcctttgtggcgaaccgagagcagttccttgaggaatgggaagcctactacaaagaa
cgggtccactcccgggaggatcggcagagcatcctggccaattatgaggggagtctgcag
gggacccggaacaaactacagaaagccctggaaaactaccagagggctattcagaaatac
aaccttgactggaacgccctcctttctctcctgccagaggaggcatccgagatcgaagcc
cttaagaaacggctcgaagcttcggaacttcccctctataaagaaaagatttcccgtgcc
cgagctatggctgaaaagcagttcaaggaacactttgtgacccggctcaacgaatatatc
gaagaagcccgggagagtttccgggagatcaacgctattttacggagccttacctttggc
aaggaccagtatcactttaccctggaagaacggaacgaccggaaggcccagctggaggtt
atccggaaggccgcggagatccatgaaaatcaggggagcctctttgatgcattgatcagt
gagggtgagcgggaggccgtagaggaactatttaacaggatccttaaaaacgaactggac
tcctttgaggtccgccagctttgcgactaccggacctactttacctatgatattcgggtt
cgggacacctctgccatggatccaaaaacgggcaaggtccccgaactatccctatcccgg
gcgcttaaggaaaagtctggcggcgaatcccagacgccctactatgtggctatagcagcg
agtatttaccgatattacaaggacgatcctgaaaacacggtgcgcctcgtagtttttgat
gaagcctttaacaaaatggatgaacggcgcattggggttaccctagaactgttccaggaa
ctgggaatgcagatcatcacggcggtcccctcagaaaagctcgagatcatccaaccctat
atggatacggtgaacctggtgctccgctatggcaatgaaggctgggttcgggattatagg
gcggtgactgttgcggcaactacaggatcagagtga
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integrated database retrieval system
