Gracilinema caldarium: Spica_2306
Help
Entry
Spica_2306 CDS
T01573
Name
(GenBank) Cobalamin biosynthesis protein cbiB
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
scd
Gracilinema caldarium
Pathway
scd00860
Porphyrin metabolism
scd01100
Metabolic pathways
scd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Spica_2306
Enzymes [BR:
scd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
Spica_2306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
AEJ20418
UniProt:
F8F392
LinkDB
All DBs
Position
complement(2577908..2578945)
Genome browser
AA seq
345 aa
AA seq
DB search
MNKYESLFAIFAALGLDFLIGDPVFALHPVRLLGNLACKAETWSRRLLGCESSRVSNGTR
EKALPILRLRLAGMLSWFIVTIPAACIPLAGHRLLLKCGFMPVFIWDSLIIWASFAIKDL
VQHAREVTLALERDVLENKGGTQPHHGRKAVSLLVGRDPEKLDSEGVARACIESVAESSV
DSIASPLLYAVLLGPWAALLYRAINTMDSIFGHKNDRYRYFGWWAARSDDVANFIPARFS
ALAACLCASFVGGSILEAWNIFITYRKAHESPNSGHPEAAYAGVLNLKLGGPTWYPEGLV
DKPWIHPEGKAPDTSDIARALRLLYWNTAVTILVLSLCFLAFAVL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtatgaatcgctgtttgccatttttgccgccttaggactggacttccttatt
ggggatccggtttttgctctccatccggtgcggcttttagggaatttagcatgcaaagca
gaaacctggtcccggcggcttttaggctgtgagtcttctagggtatccaatgggacgagg
gaaaaagctcttcctatcctcaggctgaggctagctggtatgctttcctggtttatcgtt
accatcccggctgcttgtattcccctggcaggacatagattattattaaaatgtgggttt
atgccagttttcatctgggacagtcttattatttgggcttcctttgccatcaaggacctg
gttcaacacgcccgggaagtaacccttgctttagaacgggatgtcctcgaaaacaaggga
gggacacaaccccatcatggccgaaaagcggtgtccctgctggttgggcgggatcctgaa
aagctcgattcagagggagtcgcccgggcttgtatagaaagtgtggctgagagctctgtg
gacagtatcgcaagtccgctcttgtatgccgttcttttgggcccctgggcggccctgctg
taccgggcaattaacacaatggactcaatctttggtcataaaaatgatcggtaccgctat
tttggctggtgggccgcccgatcagacgatgtagctaattttattccagcccgtttctct
gctctggcggcgtgtctttgtgcttcctttgtgggaggttctattctggaggcatggaac
atttttatcacctatcgtaaggcccatgaaagccccaattcgggccatcccgaggcagcc
tatgcgggggtgctcaatctaaagcttggaggccccacctggtatcctgaaggtttagtg
gataaaccctggatacatcctgaagggaaagctcctgatacatcggatatagcaagggcc
cttcggttactgtactggaatacagctgtaacaatactggttctctccctttgcttcctg
gcttttgctgtactttaa
DBGET
integrated database retrieval system
