Gracilinema caldarium: Spica_2317
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Entry
Spica_2317 CDS
T01573
Name
(GenBank) ABC-type transporter, integral membrane subunit
KO
K23509
galactofuranose transport system permease protein
Organism
scd
Gracilinema caldarium
Pathway
scd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spica_2317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_2317
Transporters [BR:
scd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
Spica_2317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AEJ20428
UniProt:
F8F3A2
LinkDB
All DBs
Position
complement(2591605..2592678)
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AA seq
357 aa
AA seq
DB search
MSMLKTKGHGTHLLLPLSVLLILIVINLIKGADYFSITLINGALYGNIPNILFGAAELVI
ISIGMTLVTAASRGQDISVGVSGAITSAVFVQVVLNAGNSGPITWFTILTGFLASCLVGI
LIGAFNGSLVAIFKVQPMVATLILFTAGRSIAFLIDGKLSPVLANELISRIGGVIPGIPI
QTPILLTVLFIIIIAVILKTTNLKLYTEAVGINEGVARLNGINPILIKFTNYMILGVCTA
VAGFIAVSKAGRHDSVNLLKFIEMDAILAVAIGGNALSGGTFSIAGSIIGAYTIEVLNRT
LLRLEIGTETIKAFKAVFIIILMIIASPVVRAYVSKVVRRTRISPEITKEVSDAITK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcttaaaacgaaaggtcatggaacacacctgctccttccactatcagtttta
ctgatcctcatcgtcattaatctcattaagggggccgattacttttcgattaccctgatt
aatggtgccttgtatggtaatattcccaatattctgtttggtgccgcagaacttgtcatt
atctcaattggtatgaccctggttaccgctgcatcccgggggcaggatatcagtgttggg
gtctccggtgcgattacctctgcggtatttgttcaggttgtactgaatgccggtaattcc
ggaccgattacctggttcacgatcctcacaggtttccttgctagttgtttggtgggaatt
ctcattggtgcctttaacggctctctggttgctatttttaaggttcaacctatggttgca
accctcattctgtttactgcaggcaggtccatagcttttctgattgatggcaaattgtcg
cccgttcttgcaaatgaattgataagccggatcggtggtgttattcctggcattcctata
cagacaccaatactcttaacagtcctcttcatcattattattgcagttatcctgaaaaca
accaatctgaaactctatacggaggctgtgggaattaatgagggagttgcccggctaaat
ggtattaatccgatactgataaagtttactaattatatgattcttggtgtttgcaccgcc
gttgctggttttatcgctgtatcgaaagcaggtcggcatgacagtgttaatcttctcaaa
tttattgagatggatgccatccttgcagtagccattggtgggaatgccctgtcgggtgga
accttcagcattgctggatcaataatcggtgcttataccatagaagtactgaacagaacc
ctgctgagactggaaattggtaccgaaacgataaaggcttttaaggcggtttttattatc
atcctcatgattatcgcctcccctgtggtcagagcctatgtcagcaaagtggtcagacgg
accaggataagtccggaaattacgaaggaggtatcggatgcaatcacaaaataa
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