Gracilinema caldarium: Spica_2328
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Entry
Spica_2328 CDS
T01573
Name
(GenBank) 3-dehydroquinate dehydratase
KO
K13832
3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:
4.2.1.10
1.1.1.25
]
Organism
scd
Gracilinema caldarium
Pathway
scd00400
Phenylalanine, tyrosine and tryptophan biosynthesis
scd00999
Biosynthesis of various plant secondary metabolites
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
scd01230
Biosynthesis of amino acids
Module
scd_M00022
Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Spica_2328
09110 Biosynthesis of other secondary metabolites
00999 Biosynthesis of various plant secondary metabolites
Spica_2328
Enzymes [BR:
scd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.25 shikimate dehydrogenase (NADP+)
Spica_2328
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.10 3-dehydroquinate dehydratase
Spica_2328
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Gene cluster
GFIT
Motif
Pfam:
DHquinase_I
Shikimate_dh_N
Shikimate_DH
SDH_C
Sacchrp_dh_NADP
F420_oxidored
2-Hacid_dh_C
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
AEJ20439
UniProt:
F8F3S0
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Position
complement(2604716..2606212)
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AA seq
498 aa
AA seq
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MAKVCLCLTGKTIVKDLELVDRYRAYIDVVELRVDFLDPDERFYIRRFPALAGIPTILTV
RRKIDGGNFKEGEGARIVLLAAGLAFADTDQRRNFAYVDLEEDLDVPSLEEAARTFGTKI
IRSYHNFHGVDENLEQKLRSLRRTGDEIAKVAVMPHNYDDVARLFKVADSTKDMEKILIA
MGPHGVSTRILAERLGSHLSFTSPIAEIESDSEIQVAGPGQLDPRTLVDTYRFRSLNHKT
KVYGIIGYPLSATASPQIHNEGYSRLKMNAVYIPFPVQDLSSFFNLAETLNIQGLSVTIP
HKEAVLTYCSQRSPEVDRIGSCNTLVRAPQGWAAYNTDAQGFSDSLLEFIGKPNLLFKRV
TIIGAGGVAKAVASEIHRLKGRALVLNRTPLRAKEIAEPLNFAWAGLDARGIELIDHYRD
IIIQTTSVGMEPNIDEDPIELYKFRGKEVVMDLIYKPEETKLLKRAAKAGCKTLNGYDML
LRQAKLQFSLFTGQEYPL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaggtctgtttatgtcttactggcaaaaccatcgtaaaggatcttgaacttgta
gatcgttatcgagcctatattgatgtagttgaactgcgggtcgatttccttgatcctgat
gaacgattttacatacgaagatttcctgctttagcaggaattcctaccattcttacggtt
cgtcgaaagatagatggtggaaattttaaagaaggagaaggtgcccgaattgttcttttg
gctgctggtcttgcctttgctgatacggaccagcgccggaattttgcctatgtagatctt
gaagaagatctagatgttcccagtcttgaagaagctgcaagaacctttgggactaagatt
atccgatcctatcataattttcatggggttgatgaaaacctggaacagaaattacgcagt
ttacgcagaaccggtgatgaaattgctaaggtcgcagtaatgcctcacaattatgatgat
gtggctcgcctttttaaagttgctgactcaactaaagatatggagaaaattcttattgcc
atgggtccccatggagtaagtaccagaattctagctgaacgactgggctcccacctcagt
tttactagtcccatcgctgagatcgaatctgattcggagatccaggttgctggtcctgga
cagctagatccaaggacgctggtagatacctatcgcttccgttcacttaatcataagaca
aaagtttatggtatcattggatatcctctttcagctacagcaagtccacagatccataat
gagggctacagcagattaaaaatgaatgcagtgtatattccatttcctgttcaagattta
tcatctttttttaatcttgctgagactctcaatattcaaggactgtcggtaaccattccc
cacaaagaagctgtgttgacctattgttcccaacgttcgccagaggtagatcgaattggt
tcctgcaataccttggttcgtgcccctcagggttgggctgcttataataccgatgcccaa
ggattttctgattcccttttagaatttatcgggaaaccaaatcttctttttaaacgggta
accataattggtgctggtggtgttgctaaagcggtagcttctgaaattcaccgtcttaaa
ggccgggcgctcgttctgaacaggactccccttcgggcaaaggaaattgccgaacccctt
aatttcgcatgggccggcctggatgcccggggcatcgagcttatcgatcactatcgggat
atcatcatccaaaccacatcggtagggatggagccaaacatcgatgaagaccccatagaa
ttatataagttcaggggtaaagaagtggtcatggacctgatttacaaaccagaggaaacg
aaactgctgaaacgggccgccaaggcgggctgtaaaaccctgaatggctatgacatgctc
ctgcggcaggcgaaactgcagttttcactctttacgggtcaggaatacccactctaa
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