Gracilinema caldarium: Spica_2330
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Entry
Spica_2330 CDS
T01573
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scd
Gracilinema caldarium
Pathway
scd00061
Fatty acid biosynthesis
scd01100
Metabolic pathways
scd01212
Fatty acid metabolism
scd02024
Quorum sensing
scd04146
Peroxisome
Module
scd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Spica_2330
00071 Fatty acid degradation
Spica_2330
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Spica_2330
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spica_2330
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scd01004
]
Spica_2330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scd04147
]
Spica_2330
Enzymes [BR:
scd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Spica_2330
Lipid biosynthesis proteins [BR:
scd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Spica_2330
Exosome [BR:
scd04147
]
Exosomal proteins
Exosomal proteins of breast milk
Spica_2330
Exosomal proteins of breast cancer cells
Spica_2330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AEJ20441
UniProt:
F8F3S2
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All DBs
Position
2606808..2608571
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AA seq
587 aa
AA seq
DB search
MVRLERRTLTELVQASSLRFAKRTVFSLFSEGTLSNLVTYEDFGKLSTGVASVLQQLGLK
KGDRVMLLSENRPEWPISYFGISLAGTVIVPILTDFIAEHIGTIARHAEISAVCATEKTL
AKIKIAGISEDIPLLRIDEMDSQGIMVSIKGQEVKMEFKPLIPYKAQEDEVATIIYTSGT
TGSSKGVMLSHRNLIFEAQACRSIIKIYPRDRFLSVLPLAHTYECTIGMLIAVLNGASTT
YLGKAPTPAILMPALELIRPTIMLTVPLIIEKTYRTKIKPSLETHPLYKIPLTKPLAIKV
AGTKLIGSFGGAIRFFGIGGAALAADVEDFLQRAGFPYAIGYGLTETAPLLAGAPPFKSV
LRSTGPALKGVELRIVDQNGHIVGGAGAPKDAPEHAEGEIQARGPNVMLGYYKDPEKTAE
VFTSDGWFKTGDLGSMDKKGRLFIRGRLKAMILGPSGENIYPEEIESILNSSGYVEDSLV
YATEKGELVALVVLSEKAKTMFAATSDILHEAGKTLETTAHNVGQATQHAAQGTIQGIQH
LLQELKNTTNKRLAGFSRIHRVELQDEPFEKTATQKIKRFLYPKKKS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggtacgtttagagcgcaggaccttaactgaattggtgcaggcatcatcattacgtttt
gctaaaagaacagtattttcccttttttcagaaggaactttatcaaatctagtcacttat
gaagattttggaaagctcagtactggagttgctagtgttttacaacaactgggtcttaaa
aaaggcgacagggttatgcttctttcggaaaatcgtccagaatggccaataagttacttc
ggtatttccctggcaggaactgttattgtaccaatccttactgattttattgctgaacat
ataggaacaattgctcgacatgcagagatttctgcagtgtgtgccaccgaaaaaaccctt
gctaagattaaaatcgcaggtatttctgaggatattcctcttcttcggattgatgaaatg
gacagccagggtatcatggtttctattaaggggcaggaggttaaaatggaattcaagccc
cttattccttataaggcacaggaagatgaggttgccactatcatttatacctctggaaca
actggcagcagtaaaggggtcatgctcagccatcggaatctgatatttgaagcccaggca
tgccgaagcattataaagatttaccctcgggataggttcctttcggtattacccctagcc
catacttatgaatgtacgataggtatgcttattgcggttcttaatggtgcaagcaccacc
tatcttggaaaagctcccacaccagctattttgatgccagccttagaattaatacgacca
actattatgctcacggttccgctcattattgaaaaaacctatcgtaccaagataaaacct
tccctggaaacccatcccctttataaaatacccctaaccaaacctctcgcaataaaggtt
gccggaactaagttaattggttcttttggaggagccatacgatttttcggtattggaggt
gcagccttggcagcggatgtagaagattttttacagcgagcaggctttccttatgcaatc
ggttatggtctaaccgagactgccccccttttggcaggagcaccaccttttaagtcggtg
cttcgttccaccggtcctgcccttaaaggggtagagctgcgcattgtggatcagaatggg
catattgttggaggagcgggggctcccaaagatgcaccagaacacgcagaaggagaaatt
caggccagaggacctaatgtcatgttagggtattacaaggatccggaaaagaccgctgag
gtctttaccagtgatggatggttcaaaacaggcgatctgggcagtatggataaaaagggc
agactctttatccgggggcgtctcaaggctatgatacttggtccttcgggagaaaatatc
tatccagaagagatcgaaagtatattaaatagttcaggttacgtggaagactctctagta
tatgccactgaaaagggagagctggtagccctggtagttttaagcgagaaggctaaaacc
atgtttgccgccacttctgatatactacatgaggcaggaaaaacccttgaaacaacagcc
cataatgtcggacaagcaactcagcatgctgcccagggaacgatacaggggatccaacat
ctcttacaagaattaaaaaatactacaaataaacggctcgcaggcttttccagaattcat
cgggtagagcttcaggatgaaccttttgaaaagaccgctacacaaaaaataaagcggttc
ctttatccgaaaaagaaatcctaa
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