Gracilinema caldarium: Spica_2335
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Entry
Spica_2335 CDS
T01573
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
scd
Gracilinema caldarium
Pathway
scd00550
Peptidoglycan biosynthesis
scd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spica_2335
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scd01003
]
Spica_2335
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scd01011
]
Spica_2335
Enzymes [BR:
scd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Spica_2335
Glycosyltransferases [BR:
scd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Spica_2335
Peptidoglycan biosynthesis and degradation proteins [BR:
scd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Spica_2335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AEJ20446
UniProt:
F8F3S7
LinkDB
All DBs
Position
complement(2612174..2614606)
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AA seq
810 aa
AA seq
DB search
MYQQLYLHWCQRYWLKHRHHPGYFIVVWASMTGILLMFMLALPDPLFNVPYSPVLYDRRG
KLLGAQVSLDGQWRLPSTGPINKKFSIALQVFEDHRFYMHPGIDPLAFVRAAMQNAQKGR
IVSGGSTITMQVVRLMRGNRDRTMIEKVVEALLALRLEWTYSKRDILALYSAHAPFGGNV
VGLEAASWRWFGHASQDLSWAEAATLAVLPNNPGLVHPGTNRSVLQKKRDALLQKLFNLR
YLDRDSYFLALQEPLPGPPKPLPRLAPHLLARAVAENSLPLIESTLDGLLQKRATDTLER
YVQQFSKNAVMNGACLILDTRTGEVLAYVGNVFATEEALSYGRAVDIISAPRSSGSLLKP
FLYGAMLDSGELMPAELVSDIPTRIGSYNPENFTKSYLGAIPADQALARSLNIPAVRELR
TYGVDRFARLLRRLGFTTLFRPGDDYGLPLVLGGAEVTLWDVTSVYAGLARRALFDTAKT
AFFPPWYQSDDHKASQSEQRNILKKVVTVASEDQLLSRGAAWLTLNALSMVNRPGEDGAW
ELFKSSRKVAWKTGTSFGYRDAWAVGTTPEYTIGVWIGNASGEGRAELQGSLTAAVVMWE
LFSAMPATTWFPRPDADLVPVEVCAISGLPISQNCEASRIDYIPYNAPRKESCHFCVSIP
MTIDRTNRVIITADMKDPVVYEKHFVLPPAEEYFYKRWNLTYQGLPPLKPEHQVHSDGNS
VPEIAFVNPEASSAIYIPVEIDGKSGRLVCTATHRRASAILFWHLDDTYVGSTKGIHQIE
IRPGPGTHILTLVDETGSSLHRSFTILSEP
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
ttgtaccagcagctgtacctgcactggtgccaaaggtattggcttaagcaccgacaccac
ccgggttacttcatagtagtctgggcatccatgacgggtattcttcttatgtttatgctg
gctttgccagatccgctcttcaacgtaccctattctccggtgctttatgatcgcaggggt
aagcttctaggggcacaggtatcattggatggacagtggaggctcccttcgacagggcct
attaataagaaatttagtattgccctccaggtattcgaagatcaccgtttttatatgcac
ccagggatcgatccactggcttttgtgcgggcggccatgcaaaatgcgcagaagggtagg
attgtttctgggggctctactattaccatgcaggtggttcgacttatgcggggaaaccgc
gatcgaactatgattgaaaaagtggtagaggccctactagccttacgactggaatggacc
tattcaaaacgagacatccttgccttgtatagtgcccatgcaccctttgggggaaatgtg
gttggtcttgaagccgcttcttggcgctggtttggtcatgcatctcaggatttgtcatgg
gcagaggcagctaccctggcggttttaccgaacaatcccggcctcgtacaccccgggacc
aatcgaagtgttttgcagaaaaagcgagatgccctcctgcagaagctttttaaccttagg
tatctggatcgggattcctatttcctcgctttgcaggaacccttgccaggtccaccaaaa
ccactgccccgtcttgctccccatctactagcccgggcggtagcagaaaatagtttgccc
cttatagaaagcaccttggatggtctgcttcaaaagcgggctacggatactctggaacgg
tatgttcagcaattttccaaaaatgcggtgatgaatggagcctgtctcatcctggatact
agaaccggcgaagtacttgcttatgtagggaatgtgtttgcgactgaggaagccctttcc
tatggccgtgctgtggatattattagtgctcctcgtagttccggcagcttgttaaaaccc
tttctgtatggggctatgctcgattctggggaattaatgcccgctgaactcgtcagtgat
atacctacgcgaataggcagctataatcctgagaattttactaaaagctatctcggtgca
atcccggcggaccaggccctggcccgttctctaaatatacccgcggtaagagaattgcga
acctatggtgtagacaggtttgcccggctcctgaggcgtttgggctttacaaccctcttt
agaccgggggatgactatggattgccccttgtactaggcggtgcagaggttacactgtgg
gatgttacctcggtgtatgcgggcctggcccgccgggcgctttttgatacagccaaaaca
gcttttttccccccttggtatcaatctgatgatcataaagcctctcaatctgaacagcga
aacatcctgaaaaaggttgttacagtagcctcagaggatcaattgctttctcggggagcc
gcttggctgacactgaatgctctttccatggtgaatcgtcctggtgaagatggagcttgg
gaactctttaaaagttcccgaaaagttgcctggaaaactggaactagttttggatacaga
gatgcctgggcagttggaacgactcctgagtataccattggtgtctggatcggtaatgca
tccggtgaagggcgggctgaactacagggttcccttaccgccgctgtggttatgtgggaa
cttttttctgctatgccggcaaccacctggtttccccggcccgatgcagatctcgttcct
gttgaggtctgtgctatatctgggttgccgataagccaaaactgtgaagcttctcggatc
gattacatcccctataatgccccaaggaaagaaagctgtcatttttgtgttagcatacca
atgactattgatcgaactaatcgggtcataattactgcagatatgaaagatccagttgtt
tatgaaaaacattttgttttaccaccagcagaagaatatttctacaagcgatggaatctg
acctaccaggggcttccgccactaaaaccggaacaccaggtacattccgatggaaattcg
gtgcctgagattgcttttgtaaatccagaagctagcagtgcaatctatattcctgtagaa
atagatggaaagtctggccggctcgtatgtaccgccactcatcgacgagccagcgcaata
cttttctggcatcttgatgatacctatgtaggttctacaaagggaattcatcaaattgaa
attcgtccaggtccagggacgcatatacttacgttggtagatgaaacaggatcttctcta
catcggagtttcactatactcagtgagccctag
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