Gracilinema caldarium: Spica_2398
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Entry
Spica_2398 CDS
T01573
Name
(GenBank) phosphoribosylformylglycinamidine synthase
KO
K01952
phosphoribosylformylglycinamidine synthase [EC:
6.3.5.3
]
Organism
scd
Gracilinema caldarium
Pathway
scd00230
Purine metabolism
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
Module
scd_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Spica_2398
Enzymes [BR:
scd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.3 phosphoribosylformylglycinamidine synthase
Spica_2398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_5
AIRS_C
FGAR-AT_linker
Motif
Other DBs
NCBI-ProteinID:
AEJ20508
UniProt:
F8F461
LinkDB
All DBs
Position
2688484..2692902
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AA seq
1472 aa
AA seq
DB search
MQETPTRQSDHTNILRVYVEKRLGFDIEAQHLKHDIVTFLGVRYPVLARLESVRILHRYD
VAHLTEDQFHRACVLVFAEGQCDRFYVQTPVPAEPGEQFFAVEYLPGQYDQRSDSAEQCV
ELAVGVRPRVRSARVYLFKTAGEPLKSEPLTPEILSSIKEYIINPVDSREASLELPESLE
DPETTVPPVPVVEGFARSDDQALASLARAYGFAMSIDDLRFCRDYFARIGRDPTETELRV
LDTYWSDHCRHSTFTTELREVEFVGPEGQEGSQVDELAALRRAWDRYNETRQAVYGEAGS
AQRPVTLMDLATIGAKALKRQGKLEDLEESAEINACSIRVTAHFAGAGGVGGAGGAGGTV
AAGGAGGVGGAGGAGAAGGAGAAGGAGAAGAAGGVGGVTSEPWLLMFKNETHNHPTEIEP
FGGAATCLGGAIRDPLSGRAYVHQAMRVSGGADPRQSLLATIPGKLPQIKIAREAAAGYA
SYGNQIGLATGQVAEFYHPGFAAKRMELGAVIGAVPEVWVRREEPQPGDVVLLVGGKTGR
DGIGGATGSSKVHTGKSVEEAGAEVQKGNPVEERKLQRLFRKPEVTRLIKRCNDFGAGGV
SVAIGELAEGLDINLDAVPKKYAGLNGTELAISESQERMAVVVAPEDVAAFIAAAAAENL
TAVPVATVTDRGRLRMTWRGQMVVDLERSFLDTNGARRSARVRVVPGAGTAVAGKAGAQS
AGTGPAGGSPTAAGPASAAAEASHISARTMLENLERELRSLRTGSRRGLQERFDGSIGAG
SVLFPWGGREQGTPECGMAALLPALDKECLTASLMTFGYNPDLAVISPYRAAKGAIREAL
AKFACLGGNPWQARLSLQEYFERTTSAEAWGKPLAALLGALEAQLELGVAAIGGKDSMSG
SYIDTERGIDLKVPPTLVAFAAGVCPVEQIRSGALSSKTGSTLVLLAQGNPVPHKEQSQE
RPAPAQGGKAGQGKTAQDEWDNFKANMNTLRALSEAELVRSAYPVQAGGIATTLAMMAFG
NMTGLEYNGYSEGLFDPDWYQGSVIIELDEKAFSSCARSTEAILAEAGSWAILGRTIDEP
IFRIVLDDGDPASLLADDAPDLRVAEYPLAVLRRAWEYPLLNVYPQTSTGISAAEAGDED
ERLDIGLWDRTRETAPPTMAGTAAQIKAASGTMPLQEKAAKQSEAIYHAPAREPQVPRHA
PAQLRGAKPLVVLPVFPGTNCEWDMERAFRRAGAETRQVLFRNRDRQDVLESTAELAAAV
RECQILALSGGFSAGDEPDGSGKFIANALRAPAVRQAVQDLLDRRDGLIIGICNGFQALI
KLGLVPYGEFRDADEHMPTLTFNKLGRHISRMVQTKVMSNLSPWLSLERLGAVHTIPVSH
GEGRIAIAEDLARELFNRGQVPFCYIDEGGFPTMAEPWNPNGSAWAIEGLTSPDGRILGK
MGHSERCGTYVHVNIPGNKEQRIFEAGVRYFG
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagactccaacccggcagtcagaccatactaacatactgcgtgtttatgtggaa
aaacgtcttggttttgatatagaagcccagcatcttaagcacgatattgtcacctttctc
ggagtccgctaccctgtactcgctcggcttgagtcagtgcgtattctgcatcgctatgat
gtggcccaccttaccgaagaccagtttcatcgggcctgtgtgctggtatttgcagaggga
caatgcgaccggttttacgtgcagaccccggtgccagctgagccgggggagcagtttttt
gcggtagaatatctgccgggccagtatgaccagcgttccgattcggcagaacagtgcgtg
gagctcgccgttggggttcgtccgcgggtccgttcagcccgggtctacctgttcaaaact
gcgggagagcccctgaaatcggagcccctgacaccggaaatcctgtcatcaataaaagag
tatatcatcaatccagtggacagccgggaagcatctttagaactgccggagagtcttgag
gatccggaaactacggtgcccccggtgccggttgtggagggctttgcccggtccgatgac
caggctctggccagtctcgctcgagcctacggctttgccatgtccatcgatgacctgcgg
ttctgccgggactatttcgcccgtatcggccgagatccgactgaaacggaactgcgggtg
ctcgatacctactggtccgatcattgccggcacagtactttcaccaccgaactgcgtgaa
gtggaatttgtcgggccagagggacaagagggatctcaggttgatgaactggcggcgctc
aggcgggcctgggatcggtacaacgaaacccgccaggctgtgtacggtgaagcgggctcc
gcccagcggccggttaccttgatggacctggcgactatcggggctaaggccctgaagcgg
caggggaaacttgaggacctggaagaatcggcggaaatcaacgcctgttcaatcagggtt
accgcccattttgcgggggctggcggtgttggcggtgctggcggtgctggcggcacggtc
gctgctggcggcgctggcggtgttggcggcgctggcggggctggcgctgctggcggcgct
ggcgctgctggcggcgctggcgctgctggcgctgctggcggtgttggcggcgtgaccagt
gagccctggcttctcatgtttaaaaacgaaacccataaccatcctaccgagattgaaccc
tttggtggggccgccacctgtctcggcggggccattcgggatcccctgtcgggccgggcc
tatgtgcatcaggctatgcgggtctcaggcggcgccgatccccgacagagcctcctggct
actatccccgggaaactgcctcaaattaagatcgcccgggaagccgcggcgggctatgca
tcctatggaaaccagatcggacttgccacagggcaggttgccgaattttaccatcctggc
tttgcggcaaaacggatggaactgggagccgttatcggtgcggtgcccgaagtctgggtc
cgacgggaagagccccagccaggggatgtggtactcctcgtaggcgggaaaaccggccgg
gatggcatcggcggggcgacgggctccagcaaggtccatacgggaaaatcggtagaagaa
gccggggcagaagtccagaagggaaatccggtagaagaacggaagctccagcggctcttt
cgaaagcccgaggtgacccggctcatcaaacgttgtaatgactttggtgctggcggcgtt
tcggttgccatcggcgaactggccgagggactcgacatcaatttggatgctgtgccgaaa
aaatatgcgggacttaacggaacagaacttgccatttctgagtcccaggaacggatggct
gtggtggtggccccggaggatgttgcggcctttattgccgcagcggcggcggaaaacctt
accgccgtaccggtagccaccgttaccgacaggggacgcctcagaatgacctggcggggc
cagatggtggtagacctggagcggagctttttagacaccaacggagcccgccgcagtgcc
cgggtcagggttgttcctggggccgggacagcagtggctgggaaagccggggctcaaagt
gccgggacgggtcctgccggggggagtcctactgcggcagggcctgcttctgccgcggcc
gaagccagccatatctccgcccgcaccatgctcgaaaacctggaacgggaactgcgctcc
ctccgcaccgggagccgccggggcctccaggaacgctttgatggttccatcggggcgggt
tcggtactcttcccctggggaggccgtgaacagggtacccctgaatgcggcatggccgcc
ctcctgccggccctcgataaggaatgtcttactgcgagcctcatgacctttggctataac
ccggacctggcggttattagcccctaccgggccgccaagggcgctatccgggaagccctg
gccaaatttgcctgcctcggcgggaatccctggcaggcccggctatcgctccaggaatat
tttgaacggaccacgagcgctgaagcctggggaaagcccttggcggccctgctcggcgcc
ctggaagcccagcttgaactgggggtagcggcgatcggcggcaaagattccatgtcgggg
tcttatatcgatacggaacggggcatcgacctgaaggttccaccgaccctcgtcgccttt
gccgccggcgtctgccccgtagaacagatccggtccggtgccctgagcagtaaaacaggc
tctacgctggtgctccttgcccagggaaatccggtgccgcacaaggagcagtcccaagaa
aggcctgcacctgcacaagggggaaaggctggtcaggggaaaacggctcaggacgaatgg
gacaacttcaaagcaaacatgaataccctgcgggccctttcggaagctgagctggtacgg
tcggcctacccggttcaggccgggggcatcgccaccaccctggcaatgatggccttcggg
aacatgaccggccttgagtacaacggctacagcgaaggactctttgacccggactggtat
caggggtcggtcattatcgagctggatgaaaaggccttctcgagctgtgcccgtagtacc
gaagcgatcctcgccgaagcgggcagctgggccattctagggcgtactattgatgagcct
atcttcaggatcgtacttgatgatggggacccggcgtccctcctggcggatgatgccccg
gacctccgggtggccgagtatcccctggcggtactgcgccgggcctgggagtatcccctc
ctcaatgtctatcctcagacatccaccggcatcagtgcggccgaagcaggggatgaggat
gaacggcttgatatcggcctctgggaccggaccagggagacggcaccgccaaccatggcg
ggaactgcggcccagataaaggccgcctccggtaccatgcccctgcaggaaaaggcggcg
aagcagagcgaagcgatatatcacgcaccggcccgggagcctcaagtaccgcgccacgca
ccggcccagctcaggggagccaagccgctcgtggtgctgccggtgttcccgggaaccaac
tgcgagtgggacatggaacgggcattccgcagagccggcgctgaaacaaggcaggtactg
ttccgcaaccgggaccggcaggatgtgcttgagtccacggcggagctcgcagcggctgtc
cgggaatgccagatccttgctctttcgggaggtttcagcgccggcgacgagcctgatggg
tcggggaaattcatcgccaatgcattgagggctcctgcagtccgccaggcggtgcaggat
ctccttgacaggcgggacggacttatcatcggcatctgcaacggcttccaggcgctcatc
aaactggggctcgtaccctatggtgaattccgggatgcggatgagcatatgccgaccctg
acctttaacaagctgggccgccatatttcccggatggtccagaccaaagtgatgtcgaac
ctgtccccctggctcagtctggaacggctcggggcagtccacaccataccggtcagtcac
ggcgaggggcgaatcgccatagctgaggacctggcccgagagctctttaaccgcggtcaa
gttcccttctgttatattgatgaagggggcttcccaactatggcagaaccctggaatcca
aacggctcagcctgggctatcgagggcctcacgagccccgacggccgtatcctggggaaa
atgggccacagtgagcgttgcggaacctatgtacatgtgaatatcccggggaacaaggaa
cagcggattttcgaagccggggtacggtactttgggtag
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