Gracilinema caldarium: Spica_2499
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Entry
Spica_2499 CDS
T01573
Name
(GenBank) Alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
scd
Gracilinema caldarium
Pathway
scd00470
D-Amino acid metabolism
scd01100
Metabolic pathways
scd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Spica_2499
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Spica_2499
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scd01011
]
Spica_2499
Enzymes [BR:
scd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Spica_2499
Peptidoglycan biosynthesis and degradation proteins [BR:
scd01011
]
Precursor biosynthesis
Racemase
Spica_2499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AEJ20604
UniProt:
F8F4F7
LinkDB
All DBs
Position
complement(2818405..2819523)
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AA seq
372 aa
AA seq
DB search
MRATRAIIHLERLKANLAEIRKKIGPKTAICIPVKADAYGHGAVRIGIAAIKAGAKFLAV
ASVQEGIELREAGIVAPILLFSLPIPEELEDVVRYHITPLVPDTEFAHLVGKTAERLGEI
LPVHIKIDTGMGRIGCRPENILDLVEVITSYPSLHWEGTATHLSVADSLDTDDRAYTQKQ
LQRFSDAVDALCQHGYKPGILHAANSGAVVLHENSYFDMVRPGLLAYGYPPIPELAKTVP
VQPVMELQTHVVFMKKVYPGEAISYGRKWQASQETVIGTLPIGYADGLPRRLSGKLSLSI
GGRRYPLVGRICMDQCMIDLGMDSPVRRWEPVTVFGGTEADPTAAELSELLGTIPYEITC
GINKRVPRVYVE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctacacgagcaattatccatcttgagcgacttaaggcaaatcttgctgaaatt
cgaaaaaaaattgggccaaaaacggcgatttgtattccggtaaaggccgatgcctatgga
catggggcggtaaggatcggtattgcagctattaaagcaggagcaaaattccttgcggtc
gcttctgtacaggaaggaattgaattacgggaagcggggatagtggcccctatcctgctt
ttttccctccccattcctgaagaattggaggatgtggtccgatatcacattactcccctc
gtaccagatacagaatttgctcatttggtcgggaaaactgcggaacggcttggtgaaata
cttccggtacatattaaaattgatactggaatgggacggattggatgtcgtccggaaaat
attttggatctggttgaggtgataacatcctatccatcacttcattgggaaggaactgct
acacatctctccgtggctgattctctcgataccgatgatcgggcctacacacaaaagcag
cttcagcgattctcagatgctgtggatgcattgtgtcagcatggttataaaccgggaatc
cttcatgcggcaaattccggagcggtagttcttcatgaaaattcctattttgatatggta
cggccgggtctgttagcctatggttatcctcccattccagaattagcaaagacagtacct
gtacaaccagtaatggaactgcaaacccatgtggtttttatgaagaaggtatatccggga
gaagccatttcctatggccggaaatggcaagcgtcacaggaaaccgttatcggaacactt
cctattgggtatgccgatggacttccccggcggctttcagggaaattatccctgtctata
ggaggtaggcggtatcctttagttggacgaatttgcatggatcagtgtatgatagacctt
ggaatggatagtcctgttaggcgttgggaaccggtgactgtgtttggtggaaccgaagcg
gatcctaccgccgcagaactgtcagaacttttggggactatcccttatgagatcacctgt
gggatcaacaaacgggtcccgcgggtctatgtagaataa
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