Gracilinema caldarium: Spica_2627
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Entry
Spica_2627 CDS
T01573
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
scd
Gracilinema caldarium
Pathway
scd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spica_2627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scd03400
]
Spica_2627
Enzymes [BR:
scd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Spica_2627
DNA repair and recombination proteins [BR:
scd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spica_2627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
SUS_EPBD
Motif
Other DBs
NCBI-ProteinID:
AEJ20725
UniProt:
F8EZK1
LinkDB
All DBs
Position
2978203..2978781
Genome browser
AA seq
192 aa
AA seq
DB search
MNDSLQRCPWCLSDSEYQQYHDYEWGVPLHDEQKLFSLLILEGAQAGLSWITILKRRKGY
LDAMDNLDPDKLARYNDSDITRLMLDSRIIQNRRKLESAVSNARAFLAMKERGISFSNWL
WAWVEDRPIQNHWSSLSEVPAVTPLSDTISRELKRLGFTFVGPTIIYAYMQSAGLVNDHL
VQCYRHYELLPG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcattacaacgttgtccttggtgcctctctgatagtgagtatcagcagtat
catgattatgagtggggtgttcccttgcatgatgagcagaagcttttttcattgcttata
ctcgaaggggctcaggctgggctttcatggatcactatcttgaaacgccgtaaggggtac
ctggatgctatggacaacctggatccagataaactggctcggtacaacgatagcgatatt
acacggctcatgctcgatagtcgtattatccaaaaccgtagaaaacttgaatccgcagtc
agtaatgcccgagcctttcttgccatgaaagagcgggggatatccttttctaactggctc
tgggcatgggttgaggaccggccgatacaaaaccactggagcagtctttccgaggtaccc
gccgtaacacctctttcagatactatttccagagagctgaaacgtctgggcttcactttt
gtgggacctactatcatctatgcctacatgcaatctgcaggccttgtgaacgaccacctc
gtacagtgctaccgtcattacgaacttttacctggctga
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