Gracilinema caldarium: Spica_2779
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Entry
Spica_2779 CDS
T01573
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scd
Gracilinema caldarium
Pathway
scd00061
Fatty acid biosynthesis
scd01100
Metabolic pathways
scd01212
Fatty acid metabolism
scd02024
Quorum sensing
scd04146
Peroxisome
Module
scd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Spica_2779
00071 Fatty acid degradation
Spica_2779
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Spica_2779
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spica_2779
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scd01004
]
Spica_2779
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scd04147
]
Spica_2779
Enzymes [BR:
scd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Spica_2779
Lipid biosynthesis proteins [BR:
scd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Spica_2779
Exosome [BR:
scd04147
]
Exosomal proteins
Exosomal proteins of breast milk
Spica_2779
Exosomal proteins of breast cancer cells
Spica_2779
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEJ20875
UniProt:
F8F293
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All DBs
Position
3137438..3139150
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AA seq
570 aa
AA seq
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MNTATTPWAFLDKYRGTYFNGEWPTLPEMFRITVQRYGERPCFTIYEGDERISLTYNEAL
TKIEAVSRWLHAQGIRKGDKVAVTGKNSPEWTVAYLGILFAGATVVPIDYQLKTDEIELL
LRTADVAILFVDEEKHNHFVEQPGQLTTIISLKKGVGTYIYDLDGPQTEIVPAAETDLAA
ILFTSGTTGNPKGVMLTHKNLVSDCYIAQSNLTIYHTDVFYALLPIHHSYTMLAVFIEAI
SVGAELVFGKRIVTKAILKDLKEAKVTMFLGVPMLFNAVLNGIMKGIKAKGPLVYGLIRV
MMSISGFIKKVFKVNPGKKMFHSILDKASLSSIRICISGGGPLAPRIFKQYNQLGIDFVQ
GYGLTETSPIIALNPKEHYKETSVGKVLPMTDLRILNPNEQGIGEIIVKGPMVMQGYYKM
PEETRETFTEDAYLKTGDLGYLDSENYLYLTGRAKNMIVTEGGKNVYPEEIENEFQLYGE
IEQILVRGYLIDAKMKTEGIEALVYPNQEAFKDEVGALKPKEEIKRRIDEIITEVNQRLK
PYQKIERVTILDEPLEMTTTKKIKRNAVKV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagccaccacaccttgggccttcctggataaatatcggggaacttattttaac
ggagaatggccaaccttaccagaaatgttccgaattaccgtacaacggtacggtgaacgg
ccctgttttaccatttatgaaggtgatgagcggatcagcctcacctataacgaagcactc
accaaaattgaagcggtaagccgatggctccacgctcagggaatccgcaagggtgataag
gtggcagtgacggggaagaattcccctgaatggacagtagcatatctagggattcttttt
gcgggtgctaccgtggtgcccatcgactatcagcttaaaactgatgaaattgaactttta
ctccgtactgccgatgtggcaatcctctttgtagacgaagaaaaacataatcactttgtt
gaacaaccgggtcagcttacgacaattatttctctcaaaaagggtgttggaacctatatt
tacgacctggatggcccccagaccgagattgtaccagcagcagaaactgatctagcggct
atcctctttacatccggaaccacgggtaatcccaagggggtaatgcttacccacaagaat
ctcgttagcgactgctacatagcccaaagcaacctgaccatttatcacaccgatgtattc
tatgccctgctacccattcatcattcctataccatgctggcggtctttatcgaagctatt
tcggtaggggccgaactggtctttgggaaacggattgtaacgaaggccatactgaaggat
ttaaaagaggccaaggtaaccatgttccttggggtgcccatgctctttaatgcagtcttg
aatggtattatgaagggcattaaagctaaaggaccgcttgtttacggcctcattcgggta
atgatgagcatctccgggtttattaaaaaggtctttaaggttaatccgggtaaaaaaatg
ttccattcaattctggacaaggcgtccctttcatcaatccgcatctgtatttccggcggc
ggacctcttgcccccagaatctttaaacaatacaaccagctggggatcgattttgtccag
ggctatggattaaccgaaacctctcccattattgccctgaatcctaaggaacattacaag
gaaaccagcgtgggtaaggtgcttccaatgaccgatttacggatccttaatccaaacgaa
caaggtatcggggaaattattgttaaaggacctatggtaatgcaaggctattacaaaatg
ccggaagaaacccgggaaacctttaccgaagatgcttacctgaaaactggtgacctgggc
tacctggacagtgagaactacctctacctgaccggccgggcgaaaaacatgatcgttacc
gagggtggaaaaaatgtatacccagaagaaatagaaaacgaattccagctttatggagaa
attgaacagatcctggtacgaggatacctcatcgatgcgaaaatgaaaaccgaaggcatt
gaagcccttgtatatccaaaccaggaagcctttaaggatgaggtcggagcattaaagccc
aaggaagaaattaagcgccggattgatgaaatcatcaccgaggtgaaccagcggcttaaa
ccttaccagaaaattgagcgggtcaccattctggatgaacccctcgaaatgaccaccacc
aagaaaataaaacggaacgccgttaaagtataa
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