Gracilinema caldarium: Spica_2792
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Entry
Spica_2792 CDS
T01573
Name
(GenBank) Tryptophan synthase beta chain
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
scd
Gracilinema caldarium
Pathway
scd00260
Glycine, serine and threonine metabolism
scd00400
Phenylalanine, tyrosine and tryptophan biosynthesis
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
scd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Spica_2792
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Spica_2792
Enzymes [BR:
scd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Spica_2792
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GFIT
Motif
Pfam:
PALP
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AEJ20888
UniProt:
F8F2A6
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Position
complement(3147615..3149024)
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AA seq
469 aa
AA seq
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MSIHDKKPYGPIRVVLSEDEMPRQWYNLAADFKTPMLPPLGPDGKPVTPDMLSAIFPAPL
IEQEVSQERWIDIPEPVLEILSRWRPSPLHRAVALERALGTPARIYFKNESVSPAGSHKP
NTAVAQAYYNKISGVKKLTTETGAGQWGSALAFSCALMGMECKIYMVKVSFEQKPFRKLM
MQTWGGTCIPSPSPYTEAGRSVLAKDPNCPGSLAIAISEAVEEAVSDKTGSTKYALGSVL
NHVMLHQTIIGQEVKAQLAKIGERTPDSVIACVGGGSNFAGLAFPFVKDKIEGANIDIIA
VEPASCPTLTKGVFAYDLGDMSGMTPLLPMHTLGHEFIAPTIHAGGLRYHGMAPLVSKAV
LDGLVEPRSVHQLECYDAAVTFARTEGIIAAPESSHAIAMAIREAKQAKEEGKEKVIVFG
LSGHGLMDLAGYEKYFAGQLQDYEFSGEDLENSLKCIQSFPKPPAAVAR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtctatccacgataaaaaaccctatggaccaatccgggtggtgctttcggaagatgaa
atgccccgccagtggtacaatctggcggcggatttcaaaacccccatgctgcctcccctg
gggcccgatggaaagcccgtaacaccggatatgctttccgctatttttccagcccccctt
attgagcaggaagtgtcccaggagcgctggattgatatacctgaaccggtgctggagatt
ttgtcccgctggcggccgtcgcctttgcatcgggcggtagcccttgagcgggccttaggt
accccagccaggatttattttaaaaatgaaagcgtatcccccgcaggaagtcacaagcca
aacacggcggtcgcccaggcctattacaataaaatatcgggagttaaaaaactaacaact
gaaacaggggctggccaatggggaagtgccctggccttctcctgtgccctcatgggtatg
gaatgtaaaatttacatggttaaggtaagctttgagcagaagcccttccgtaaattgatg
atgcagacctggggcggcacctgtattcccagtccgagcccctatactgaggctggccgg
tctgttcttgcaaaggaccccaattgtcccggtagtcttgccatcgccatcagtgaagcg
gtggaagaagcggtgtctgacaagacgggttcaaccaagtatgcccttgggtcggtcctg
aatcatgtcatgctgcatcagaccattattggtcaggaagtaaaggcccagttagcgaag
attggcgaacggacccccgattcggtcattgcctgtgtgggtggcggatccaattttgca
ggccttgctttcccctttgtaaaggataagatcgaaggggctaatatcgatattatcgcg
gtagaacccgcttcatgtccgacccttaccaagggtgtttttgcctatgacctgggagac
atgtccgggatgacaccgctccttcccatgcataccctgggccacgagtttattgccccc
acgattcatgcagggggcctccggtaccatggtatggctccgctggtatccaaagcggtc
ctcgacggcctagtagaacccagatcggttcatcaacttgaatgctatgatgcggcggtc
accttcgcccgaaccgaaggcattatcgcagctcccgaatcgagccacgccatcgccatg
gcgatccgggaagcaaaacaggccaaggaagaaggaaaggaaaaggttattgttttcggt
ctttccggtcacgggcttatggacttggcgggttatgaaaagtactttgctggacagttg
caggattatgaattctccggtgaagatttggaaaattctctgaaatgtattcagagcttt
ccaaagccacccgctgccgttgcacggtaa
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