Gracilinema caldarium: Spica_2838
Help
Entry
Spica_2838 CDS
T01573
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
scd
Gracilinema caldarium
Pathway
scd02010
ABC transporters
scd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spica_2838
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spica_2838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scd02000
]
Spica_2838
Transporters [BR:
scd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Spica_2838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AEJ20931
UniProt:
F8F2E9
LinkDB
All DBs
Position
3201686..3202768
Genome browser
AA seq
360 aa
AA seq
DB search
MKHFMLRLMTVLCMTFLTSCIQPSIQVALLTKLDAGSIIGTSEIAAVKEFERTHPNSRIQ
IIPFDDGWDPERTKQAYKEVQNMNIQFLITSHTSTCAIEIAKDINLDKRLTIIAGATTTV
LSDKDDYILRIIPDLNQEQAVIAQKISSLQPKKLLIIRDLSNSGYTIPAQEAFLTELNRV
SPNITVRTFDFDANQFNIEELDPVLQAEIFNVLYLLIGGYKNIAGNIAQYSYQFQPQSTI
VFTPWMHNRELVNSAGPAINHALLPSLFPSRKIDPKIEAYMSALETNFHVSPTIISLKVY
QALELLDQAFKAKAVTPDQAKKWLLSKKILSTRLGTITFNAFGETIEDYYFITDISGEFH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacttcatgttaagactgatgacagtcctatgtatgacatttttaacgagctgt
attcagccttcgatacaagtcgccctccttacgaagctcgatgccggttctatcattgga
accagcgaaatcgctgcagtaaaagagtttgagaggacccatcccaatagccgtatacag
attatccccttcgatgatggatgggatccggaacggacaaaacaggcctataaagaagtt
caaaacatgaatatccagttcctaataaccagtcacacctcaacctgtgccatagagatc
gccaaagatatcaatctagataaacgacttaccattatcgccggagcgaccaccacagtt
ttaagcgataaggatgattatatcctgcgcatcattcccgatttgaaccaagaacaggct
gtgattgctcaaaaaataagctcattacaaccaaaaaaactactcatcattcgggatctt
tctaattccgggtataccatacccgcacaggaagcctttttaacagaattgaaccgtgta
tcgccaaacataacagttcgcacctttgacttcgacgcaaaccagttcaatatagaggag
ctggatcctgtactacaggctgagatttttaatgtcctgtacctgcttattgggggttat
aaaaatattgcaggcaacattgcccaatatagttatcaattccagcctcaaagtaccatt
gtctttactccctggatgcacaatagagagctagtgaattccgctgggcctgcaatcaac
catgctctgcttccctcgctttttccttctcgaaaaatagatcctaaaatagaagcatac
atgtccgcacttgaaaccaattttcatgtaagtccgactattattagcctcaaagtttac
caggctctcgaacttctcgatcaagcatttaaagccaaagcggtgacacccgatcaggca
aaaaaatggcttctttccaaaaaaattttatcaacccgactggggactatcacctttaat
gctttcggtgaaacaatagaagattattactttatcaccgatatttcaggagaatttcat
tga
DBGET
integrated database retrieval system
